Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 KCNMB3P1-202ENST00000493696 3389 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 SPATA2P1-201ENST00000431223 2055 ntBASIC5.68□□□□□ -1.5
CLRN1P58418 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CLRN1P58418 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLRN1P58418 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLRN1P58418 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLRN1P58418 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.67□□□□□ -1.5
CLRN1P58418 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
CLRN1P58418 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.67□□□□□ -1.5
CLRN1P58418 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CLRN1P58418 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.67□□□□□ -1.5
CLRN1P58418 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLRN1P58418 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLRN1P58418 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLRN1P58418 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLRN1P58418 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLRN1P58418 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.67□□□□□ -1.5
CLRN1P58418 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CLRN1P58418 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.67□□□□□ -1.5
CLRN1P58418 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLRN1P58418 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.67□□□□□ -1.5
CLRN1P58418 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLRN1P58418 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CLRN1P58418 RNU6-353P-201ENST00000364266 108 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLRN1P58418 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLRN1P58418 RNU6-413P-201ENST00000384115 107 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 RNU6-316P-201ENST00000391027 107 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.67□□□□□ -1.5
CLRN1P58418 AL031779.1-201ENST00000415663 330 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.67□□□□□ -1.5
CLRN1P58418 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC5.67□□□□□ -1.5
CLRN1P58418 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.67□□□□□ -1.5
CLRN1P58418 MTND4P20-201ENST00000424125 869 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 HSPE1P16-201ENST00000426640 348 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.67□□□□□ -1.5
CLRN1P58418 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.67□□□□□ -1.5
CLRN1P58418 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.67□□□□□ -1.5
CLRN1P58418 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.67□□□□□ -1.5
CLRN1P58418 YWHAZP2-201ENST00000440317 728 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.67□□□□□ -1.5
CLRN1P58418 RPS19P6-201ENST00000441327 433 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.67□□□□□ -1.5
CLRN1P58418 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.67□□□□□ -1.5
CLRN1P58418 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.67□□□□□ -1.5
CLRN1P58418 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLRN1P58418 AL445991.1-201ENST00000450381 475 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.67□□□□□ -1.5
CLRN1P58418 AL035407.2-201ENST00000454090 378 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 HSPE1P22-201ENST00000456856 327 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.67□□□□□ -1.5
CLRN1P58418 RPL31P3-201ENST00000458430 332 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 RNU7-125P-201ENST00000458760 62 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 MTND4LP3-201ENST00000468320 276 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLRN1P58418 RPL34P33-201ENST00000486062 334 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.67□□□□□ -1.5
CLRN1P58418 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.67□□□□□ -1.5
CLRN1P58418 AC093664.1-201ENST00000511779 289 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 NPM1P21-201ENST00000513394 762 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.67□□□□□ -1.5
CLRN1P58418 AC113191.1-201ENST00000517759 403 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.67□□□□□ -1.5
CLRN1P58418 MTCO1P49-201ENST00000523429 802 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 OR5AK3P-201ENST00000527486 1297 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLRN1P58418 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.67□□□□□ -1.5
CLRN1P58418 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.67□□□□□ -1.5
CLRN1P58418 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLRN1P58418 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.67□□□□□ -1.5
CLRN1P58418 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.67□□□□□ -1.5
CLRN1P58418 TPRX1P1-201ENST00000557620 319 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.67□□□□□ -1.5
CLRN1P58418 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.67□□□□□ -1.5
CLRN1P58418 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLRN1P58418 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.67□□□□□ -1.5
CLRN1P58418 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.67□□□□□ -1.5
CLRN1P58418 AC021749.1-201ENST00000604322 607 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 AL392112.1-201ENST00000605115 829 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 AC022001.1-201ENST00000605193 268 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 AC105129.3-201ENST00000605455 485 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 OR2AS2P-201ENST00000606902 342 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.67□□□□□ -1.5
CLRN1P58418 AL008723.3-201ENST00000608926 449 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 HULC.1-201ENST00000612720 240 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 MIR6774-201ENST00000614651 70 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 CASC19-222ENST00000641321 1173 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.67□□□□□ -1.5
CLRN1P58418 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLRN1P58418 BIN2P1-201ENST00000504996 1530 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 DDX18P6-201ENST00000450119 1997 ntBASIC5.67□□□□□ -1.5
CLRN1P58418 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLRN1P58418 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms