Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN6P56747 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN6P56747 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN6P56747 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN6P56747 ZNF733P-202ENST00000444809 1573 ntBASIC5.29□□□□□ -1.56
CLDN6P56747 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN6P56747 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN6P56747 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLDN6P56747 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CLDN6P56747 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN6P56747 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN6P56747 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN6P56747 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN6P56747 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN6P56747 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CLDN6P56747 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN6P56747 AC104964.3-201ENST00000606115 2860 ntBASIC5.28□□□□□ -1.56
CLDN6P56747 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CLDN6P56747 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN6P56747 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN6P56747 SNORA51.8-201ENST00000384234 132 ntBASIC5.28□□□□□ -1.56
CLDN6P56747 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN6P56747 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN6P56747 NACAP7-201ENST00000407371 609 ntBASIC5.28□□□□□ -1.56
CLDN6P56747 U3.36-201ENST00000408418 213 ntBASIC5.28□□□□□ -1.56
CLDN6P56747 AC016397.1-201ENST00000412463 242 ntBASIC5.28□□□□□ -1.56
CLDN6P56747 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLDN6P56747 SRSF1P1-201ENST00000424058 520 ntBASIC5.28□□□□□ -1.56
CLDN6P56747 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDN6P56747 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLDN6P56747 TRBV5-2-201ENST00000489095 273 ntBASIC5.28□□□□□ -1.56
CLDN6P56747 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN6P56747 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDN6P56747 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN6P56747 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDN6P56747 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.28□□□□□ -1.56
CLDN6P56747 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN6P56747 HMGB1P40-201ENST00000525121 540 ntBASIC5.28□□□□□ -1.56
CLDN6P56747 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN6P56747 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN6P56747 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDN6P56747 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.28□□□□□ -1.56
CLDN6P56747 MIR4330-201ENST00000579077 105 ntBASIC5.28□□□□□ -1.56
CLDN6P56747 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
CLDN6P56747 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN6P56747 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN6P56747 AC087283.1-201ENST00000604029 1074 ntBASIC5.28□□□□□ -1.56
CLDN6P56747 AL022394.1-201ENST00000606979 292 ntBASIC5.28□□□□□ -1.56
CLDN6P56747 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDN6P56747 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDN6P56747 AC007938.2-201ENST00000604666 2634 ntBASIC5.28□□□□□ -1.56
CLDN6P56747 HSPA8P18-201ENST00000439846 1928 ntBASIC5.28□□□□□ -1.56
CLDN6P56747 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CLDN6P56747 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN6P56747 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN6P56747 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN6P56747 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN6P56747 CASC19-221ENST00000641309 1382 ntBASIC5.28□□□□□ -1.56
CLDN6P56747 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN6P56747 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.27□□□□□ -1.57
CLDN6P56747 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN6P56747 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN6P56747 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN6P56747 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN6P56747 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CLDN6P56747 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN6P56747 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN6P56747 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN6P56747 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN6P56747 RN7SKP104-201ENST00000362605 328 ntBASIC5.27□□□□□ -1.57
CLDN6P56747 RNA5SP123-201ENST00000363244 119 ntBASIC5.27□□□□□ -1.57
CLDN6P56747 MIR551A-201ENST00000385042 96 ntBASIC5.27□□□□□ -1.57
CLDN6P56747 RNU11-201ENST00000387069 134 ntBASIC5.27□□□□□ -1.57
CLDN6P56747 AL035419.1-201ENST00000397037 564 ntBASIC5.27□□□□□ -1.57
CLDN6P56747 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN6P56747 RN7SKP126-201ENST00000411143 300 ntBASIC5.27□□□□□ -1.57
CLDN6P56747 RPSAP35-201ENST00000413753 818 ntBASIC5.27□□□□□ -1.57
CLDN6P56747 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN6P56747 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN6P56747 PRUNEP1-201ENST00000425846 705 ntBASIC5.27□□□□□ -1.57
CLDN6P56747 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.27□□□□□ -1.57
CLDN6P56747 GSTM5P1-201ENST00000434751 660 ntBASIC5.27□□□□□ -1.57
CLDN6P56747 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN6P56747 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.27□□□□□ -1.57
CLDN6P56747 RPS3AP53-201ENST00000454716 778 ntBASIC5.27□□□□□ -1.57
CLDN6P56747 RPS3AP41-201ENST00000462701 778 ntBASIC5.27□□□□□ -1.57
CLDN6P56747 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
CLDN6P56747 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.27□□□□□ -1.57
CLDN6P56747 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN6P56747 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.27□□□□□ -1.57
CLDN6P56747 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN6P56747 OR51K1P-201ENST00000510214 950 ntBASIC5.27□□□□□ -1.57
CLDN6P56747 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.27□□□□□ -1.57
CLDN6P56747 RN7SKP147-201ENST00000517154 244 ntBASIC5.27□□□□□ -1.57
CLDN6P56747 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.27□□□□□ -1.57
CLDN6P56747 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN6P56747 AP004607.2-201ENST00000533949 322 ntBASIC5.27□□□□□ -1.57
CLDN6P56747 NPM1P42-201ENST00000560329 862 ntBASIC5.27□□□□□ -1.57
CLDN6P56747 MIR3934-201ENST00000579806 107 ntBASIC5.27□□□□□ -1.57
CLDN6P56747 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms