Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.07□□□□□ -1.76
CMC4P56277 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.07□□□□□ -1.76
CMC4P56277 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CMC4P56277 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.07□□□□□ -1.76
CMC4P56277 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CMC4P56277 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CMC4P56277 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.07□□□□□ -1.76
CMC4P56277 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CMC4P56277 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CMC4P56277 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CMC4P56277 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
CMC4P56277 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CMC4P56277 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CMC4P56277 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC4.07□□□□□ -1.76
CMC4P56277 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.07□□□□□ -1.76
CMC4P56277 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CMC4P56277 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.07□□□□□ -1.76
CMC4P56277 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CMC4P56277 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CMC4P56277 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.06□□□□□ -1.76
CMC4P56277 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.06□□□□□ -1.76
CMC4P56277 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CMC4P56277 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CMC4P56277 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CMC4P56277 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CMC4P56277 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CMC4P56277 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CMC4P56277 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.06□□□□□ -1.76
CMC4P56277 RN7SKP160-201ENST00000363804 340 ntBASIC4.06□□□□□ -1.76
CMC4P56277 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.06□□□□□ -1.76
CMC4P56277 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.06□□□□□ -1.76
CMC4P56277 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CMC4P56277 PCNPP4-201ENST00000414817 517 ntBASIC4.06□□□□□ -1.76
CMC4P56277 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.06□□□□□ -1.76
CMC4P56277 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.06□□□□□ -1.76
CMC4P56277 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CMC4P56277 GSTM5P1-201ENST00000434751 660 ntBASIC4.06□□□□□ -1.76
CMC4P56277 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.06□□□□□ -1.76
CMC4P56277 AL391987.1-201ENST00000441025 200 ntBASIC4.06□□□□□ -1.76
CMC4P56277 AC016772.1-201ENST00000444170 1261 ntBASIC4.06□□□□□ -1.76
CMC4P56277 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.06□□□□□ -1.76
CMC4P56277 DNAJB5P1-201ENST00000454004 806 ntBASIC4.06□□□□□ -1.76
CMC4P56277 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.06□□□□□ -1.76
CMC4P56277 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.06□□□□□ -1.76
CMC4P56277 SIAH1P1-201ENST00000479411 923 ntBASIC4.06□□□□□ -1.76
CMC4P56277 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.06□□□□□ -1.76
CMC4P56277 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.06□□□□□ -1.76
CMC4P56277 TEK-204ENST00000519097 3836 ntTSL 2 BASIC4.06□□□□□ -1.76
CMC4P56277 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.06□□□□□ -1.76
CMC4P56277 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.06□□□□□ -1.76
CMC4P56277 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.06□□□□□ -1.76
CMC4P56277 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.06□□□□□ -1.76
CMC4P56277 AC079064.1-201ENST00000528365 362 ntBASIC4.06□□□□□ -1.76
CMC4P56277 OR4A43P-201ENST00000532938 908 ntBASIC4.06□□□□□ -1.76
CMC4P56277 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.06□□□□□ -1.76
CMC4P56277 AC004825.1-201ENST00000555068 586 ntBASIC4.06□□□□□ -1.76
CMC4P56277 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.06□□□□□ -1.76
CMC4P56277 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.06□□□□□ -1.76
CMC4P56277 SNORD95-201ENST00000579879 68 ntBASIC4.06□□□□□ -1.76
CMC4P56277 RN7SL356P-201ENST00000582228 248 ntBASIC4.06□□□□□ -1.76
CMC4P56277 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.06□□□□□ -1.76
CMC4P56277 AL137246.1-201ENST00000607072 977 ntBASIC4.06□□□□□ -1.76
CMC4P56277 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC4.06□□□□□ -1.76
CMC4P56277 AC096586.2-201ENST00000610260 441 ntBASIC4.06□□□□□ -1.76
CMC4P56277 AC079395.2-201ENST00000610982 737 ntBASIC4.06□□□□□ -1.76
CMC4P56277 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CMC4P56277 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CMC4P56277 MAPK10-263ENST00000641052 4307 ntBASIC4.06□□□□□ -1.76
CMC4P56277 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CMC4P56277 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CMC4P56277 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CMC4P56277 AL359955.1-201ENST00000455242 3275 ntBASIC4.06□□□□□ -1.76
CMC4P56277 AC079298.1-201ENST00000625026 1619 ntBASIC4.06□□□□□ -1.76
CMC4P56277 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.06□□□□□ -1.76
CMC4P56277 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CMC4P56277 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CMC4P56277 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CMC4P56277 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CMC4P56277 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CMC4P56277 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
CMC4P56277 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.05□□□□□ -1.76
CMC4P56277 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CMC4P56277 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CMC4P56277 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CMC4P56277 CR382285.2-201ENST00000624662 1495 ntBASIC4.05□□□□□ -1.76
CMC4P56277 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.05□□□□□ -1.76
CMC4P56277 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CMC4P56277 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.05□□□□□ -1.76
CMC4P56277 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
CMC4P56277 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CMC4P56277 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CMC4P56277 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CMC4P56277 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CMC4P56277 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CMC4P56277 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.05□□□□□ -1.76
CMC4P56277 RNA5SP242-201ENST00000364171 118 ntBASIC4.05□□□□□ -1.76
CMC4P56277 OR8V1P-201ENST00000395193 873 ntBASIC4.05□□□□□ -1.76
CMC4P56277 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.05□□□□□ -1.76
CMC4P56277 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.05□□□□□ -1.76
CMC4P56277 AP000534.2-201ENST00000412729 568 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms