Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.26□□□□□ -1.57
PKNOX1P55347 AL133173.1-201ENST00000423458 397 ntBASIC5.26□□□□□ -1.57
PKNOX1P55347 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.26□□□□□ -1.57
PKNOX1P55347 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.26□□□□□ -1.57
PKNOX1P55347 NPM1P19-201ENST00000450070 712 ntBASIC5.26□□□□□ -1.57
PKNOX1P55347 AL672138.1-201ENST00000450604 1015 ntBASIC5.26□□□□□ -1.57
PKNOX1P55347 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.26□□□□□ -1.57
PKNOX1P55347 RNU7-157P-201ENST00000459600 66 ntBASIC5.26□□□□□ -1.57
PKNOX1P55347 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.26□□□□□ -1.57
PKNOX1P55347 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PKNOX1P55347 AC112184.1-201ENST00000505179 312 ntBASIC5.26□□□□□ -1.57
PKNOX1P55347 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.26□□□□□ -1.57
PKNOX1P55347 RNA5SP473-201ENST00000516402 125 ntBASIC5.26□□□□□ -1.57
PKNOX1P55347 AC027369.5-201ENST00000533838 755 ntBASIC5.26□□□□□ -1.57
PKNOX1P55347 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PKNOX1P55347 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
PKNOX1P55347 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.26□□□□□ -1.57
PKNOX1P55347 RBM22P12-201ENST00000567098 1255 ntBASIC5.26□□□□□ -1.57
PKNOX1P55347 RN7SL356P-201ENST00000582228 248 ntBASIC5.26□□□□□ -1.57
PKNOX1P55347 MIR4271-201ENST00000582451 67 ntBASIC5.26□□□□□ -1.57
PKNOX1P55347 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.26□□□□□ -1.57
PKNOX1P55347 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.26□□□□□ -1.57
PKNOX1P55347 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.26□□□□□ -1.57
PKNOX1P55347 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.26□□□□□ -1.57
PKNOX1P55347 AL137246.1-201ENST00000607072 977 ntBASIC5.26□□□□□ -1.57
PKNOX1P55347 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.26□□□□□ -1.57
PKNOX1P55347 AL357153.4-201ENST00000620487 1016 ntBASIC5.26□□□□□ -1.57
PKNOX1P55347 AP003400.3-201ENST00000624904 346 ntBASIC5.26□□□□□ -1.57
PKNOX1P55347 MIR193BHG-214ENST00000641765 509 ntBASIC5.26□□□□□ -1.57
PKNOX1P55347 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PKNOX1P55347 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.26□□□□□ -1.57
PKNOX1P55347 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PKNOX1P55347 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.26□□□□□ -1.57
PKNOX1P55347 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PKNOX1P55347 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
PKNOX1P55347 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.25□□□□□ -1.57
PKNOX1P55347 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PKNOX1P55347 OR13C1P-202ENST00000641378 2919 ntBASIC5.25□□□□□ -1.57
PKNOX1P55347 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
PKNOX1P55347 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PKNOX1P55347 RNU4-2-201ENST00000365668 141 ntBASIC5.25□□□□□ -1.57
PKNOX1P55347 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PKNOX1P55347 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PKNOX1P55347 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PKNOX1P55347 SNORA81-201ENST00000408493 178 ntBASIC5.25□□□□□ -1.57
PKNOX1P55347 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PKNOX1P55347 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.25□□□□□ -1.57
PKNOX1P55347 RPL34P3-201ENST00000421454 338 ntBASIC5.25□□□□□ -1.57
PKNOX1P55347 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.25□□□□□ -1.57
PKNOX1P55347 AL662874.1-201ENST00000426065 230 ntBASIC5.25□□□□□ -1.57
PKNOX1P55347 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PKNOX1P55347 AC124944.2-201ENST00000429866 1242 ntBASIC5.25□□□□□ -1.57
PKNOX1P55347 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.25□□□□□ -1.57
PKNOX1P55347 AC090018.1-201ENST00000434369 367 ntBASIC5.25□□□□□ -1.57
PKNOX1P55347 Z84478.1-201ENST00000438230 1219 ntBASIC5.25□□□□□ -1.57
PKNOX1P55347 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PKNOX1P55347 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PKNOX1P55347 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PKNOX1P55347 AC019084.1-201ENST00000457337 432 ntBASIC5.25□□□□□ -1.57
PKNOX1P55347 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.25□□□□□ -1.57
PKNOX1P55347 AC092754.1-201ENST00000472975 479 ntBASIC5.25□□□□□ -1.57
PKNOX1P55347 AC022133.1-201ENST00000490961 571 ntBASIC5.25□□□□□ -1.57
PKNOX1P55347 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.25□□□□□ -1.57
PKNOX1P55347 EIF3KP3-201ENST00000514461 639 ntBASIC5.25□□□□□ -1.57
PKNOX1P55347 CYCSP22-201ENST00000517555 339 ntBASIC5.25□□□□□ -1.57
PKNOX1P55347 TOMM20P1-201ENST00000534518 427 ntBASIC5.25□□□□□ -1.57
PKNOX1P55347 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.25□□□□□ -1.57
PKNOX1P55347 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.25□□□□□ -1.57
PKNOX1P55347 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.25□□□□□ -1.57
PKNOX1P55347 AC114947.2-201ENST00000565748 2125 ntBASIC5.25□□□□□ -1.57
PKNOX1P55347 AC007342.5-201ENST00000571340 2142 ntBASIC5.25□□□□□ -1.57
PKNOX1P55347 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.25□□□□□ -1.57
PKNOX1P55347 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.25□□□□□ -1.57
PKNOX1P55347 AL138895.2-201ENST00000603019 178 ntBASIC5.25□□□□□ -1.57
PKNOX1P55347 MIR6780B-201ENST00000610307 79 ntBASIC5.25□□□□□ -1.57
PKNOX1P55347 AP005431.1-201ENST00000618479 319 ntBASIC5.25□□□□□ -1.57
PKNOX1P55347 AC099654.6-201ENST00000636487 512 ntBASIC5.25□□□□□ -1.57
PKNOX1P55347 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.25□□□□□ -1.57
PKNOX1P55347 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.25□□□□□ -1.57
PKNOX1P55347 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PKNOX1P55347 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PKNOX1P55347 TRIM51GP-201ENST00000534741 1350 ntBASIC5.25□□□□□ -1.57
PKNOX1P55347 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.25□□□□□ -1.57
PKNOX1P55347 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PKNOX1P55347 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.25□□□□□ -1.57
PKNOX1P55347 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
PKNOX1P55347 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PKNOX1P55347 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
PKNOX1P55347 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.25□□□□□ -1.57
PKNOX1P55347 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PKNOX1P55347 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PKNOX1P55347 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
PKNOX1P55347 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PKNOX1P55347 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PKNOX1P55347 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PKNOX1P55347 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PKNOX1P55347 AL138820.1-201ENST00000617901 5305 ntBASIC5.24□□□□□ -1.57
PKNOX1P55347 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PKNOX1P55347 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
PKNOX1P55347 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms