Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC027216.1-201ENST00000577726 685 ntBASIC5.19□□□□□ -1.58
CDH11P55287 MIR3614-201ENST00000581261 86 ntBASIC5.19□□□□□ -1.58
CDH11P55287 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH11P55287 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH11P55287 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH11P55287 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.19□□□□□ -1.58
CDH11P55287 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH11P55287 COX6CP7-201ENST00000597056 208 ntBASIC5.19□□□□□ -1.58
CDH11P55287 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH11P55287 FAM27E4-201ENST00000605259 342 ntBASIC5.19□□□□□ -1.58
CDH11P55287 AC145423.1-201ENST00000605712 336 ntBASIC5.19□□□□□ -1.58
CDH11P55287 AL139099.4-201ENST00000614802 114 ntBASIC5.19□□□□□ -1.58
CDH11P55287 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH11P55287 MIR6729-201ENST00000618194 65 ntBASIC5.19□□□□□ -1.58
CDH11P55287 AL356490.1-201ENST00000623079 479 ntBASIC5.19□□□□□ -1.58
CDH11P55287 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH11P55287 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH11P55287 AC006453.5-201ENST00000636451 619 ntBASIC5.19□□□□□ -1.58
CDH11P55287 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH11P55287 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CDH11P55287 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH11P55287 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH11P55287 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH11P55287 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH11P55287 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH11P55287 AC117409.1-201ENST00000470499 1310 ntBASIC5.19□□□□□ -1.58
CDH11P55287 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CDH11P55287 AC087565.3-202ENST00000642085 1603 ntBASIC5.19□□□□□ -1.58
CDH11P55287 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH11P55287 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CDH11P55287 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH11P55287 AC104964.3-201ENST00000606115 2860 ntBASIC5.18□□□□□ -1.58
CDH11P55287 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH11P55287 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH11P55287 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH11P55287 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH11P55287 AP000473.2-201ENST00000602659 1537 ntBASIC5.18□□□□□ -1.58
CDH11P55287 NEPNP-201ENST00000404786 1371 ntBASIC5.18□□□□□ -1.58
CDH11P55287 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.18□□□□□ -1.58
CDH11P55287 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH11P55287 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CDH11P55287 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH11P55287 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH11P55287 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH11P55287 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH11P55287 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH11P55287 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH11P55287 AC068870.3-201ENST00000625077 2536 ntBASIC5.18□□□□□ -1.58
CDH11P55287 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH11P55287 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH11P55287 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH11P55287 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CDH11P55287 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CDH11P55287 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CDH11P55287 MIR1203-201ENST00000408812 85 ntBASIC5.18□□□□□ -1.58
CDH11P55287 AL357078.2-201ENST00000416486 427 ntBASIC5.18□□□□□ -1.58
CDH11P55287 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH11P55287 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH11P55287 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH11P55287 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH11P55287 TXNP2-201ENST00000443918 295 ntBASIC5.18□□□□□ -1.58
CDH11P55287 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.18□□□□□ -1.58
CDH11P55287 OR7E116P-201ENST00000448529 957 ntBASIC5.18□□□□□ -1.58
CDH11P55287 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH11P55287 AP006222.1-205ENST00000450734 457 ntBASIC5.18□□□□□ -1.58
CDH11P55287 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH11P55287 AC104849.1-201ENST00000462623 405 ntBASIC5.18□□□□□ -1.58
CDH11P55287 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH11P55287 RN7SL174P-201ENST00000475578 289 ntBASIC5.18□□□□□ -1.58
CDH11P55287 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH11P55287 RPS7P6-201ENST00000485777 579 ntBASIC5.18□□□□□ -1.58
CDH11P55287 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH11P55287 RPSAP51-201ENST00000497462 645 ntBASIC5.18□□□□□ -1.58
CDH11P55287 OR7E10P-201ENST00000526420 991 ntBASIC5.18□□□□□ -1.58
CDH11P55287 AC137627.1-201ENST00000545761 289 ntBASIC5.18□□□□□ -1.58
CDH11P55287 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.18□□□□□ -1.58
CDH11P55287 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH11P55287 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH11P55287 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH11P55287 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH11P55287 AC011445.2-201ENST00000599274 173 ntBASIC5.18□□□□□ -1.58
CDH11P55287 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CDH11P55287 AC040174.2-201ENST00000602701 465 ntBASIC5.18□□□□□ -1.58
CDH11P55287 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.18□□□□□ -1.58
CDH11P55287 AL136131.3-201ENST00000607600 188 ntBASIC5.18□□□□□ -1.58
CDH11P55287 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH11P55287 AC127024.6-201ENST00000621598 424 ntBASIC5.18□□□□□ -1.58
CDH11P55287 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
CDH11P55287 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH11P55287 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH11P55287 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH11P55287 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CDH11P55287 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH11P55287 AL360270.2-201ENST00000562952 5985 ntBASIC5.18□□□□□ -1.58
CDH11P55287 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH11P55287 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH11P55287 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH11P55287 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH11P55287 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CDH11P55287 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms