Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
MSH6P52701 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
MSH6P52701 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC7.46□□□□□ -1.21
MSH6P52701 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
MSH6P52701 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
MSH6P52701 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC7.46□□□□□ -1.21
MSH6P52701 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
MSH6P52701 RNU1-59P-201ENST00000364829 162 ntBASIC7.46□□□□□ -1.21
MSH6P52701 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
MSH6P52701 RNA5SP91-201ENST00000390902 119 ntBASIC7.46□□□□□ -1.21
MSH6P52701 GLULP6-201ENST00000399502 913 ntBASIC7.46□□□□□ -1.21
MSH6P52701 RN7SKP27-201ENST00000410684 333 ntBASIC7.46□□□□□ -1.21
MSH6P52701 RHOT1P3-201ENST00000436571 331 ntBASIC7.46□□□□□ -1.21
MSH6P52701 NANOGP9-201ENST00000439890 892 ntBASIC7.46□□□□□ -1.21
MSH6P52701 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC7.46□□□□□ -1.21
MSH6P52701 AC020898.1-201ENST00000474167 787 ntBASIC7.46□□□□□ -1.21
MSH6P52701 TRBV5-2-201ENST00000489095 273 ntBASIC7.46□□□□□ -1.21
MSH6P52701 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC7.46□□□□□ -1.21
MSH6P52701 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC7.46□□□□□ -1.21
MSH6P52701 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
MSH6P52701 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC7.46□□□□□ -1.21
MSH6P52701 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC7.46□□□□□ -1.21
MSH6P52701 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
MSH6P52701 DHFRP1-201ENST00000579682 559 ntBASIC7.46□□□□□ -1.21
MSH6P52701 AL020997.2-201ENST00000602607 184 ntBASIC7.46□□□□□ -1.21
MSH6P52701 AL627230.1-201ENST00000613077 211 ntBASIC7.46□□□□□ -1.21
MSH6P52701 U1.25-201ENST00000614085 162 ntBASIC7.46□□□□□ -1.21
MSH6P52701 AL591926.8-201ENST00000616876 211 ntBASIC7.46□□□□□ -1.21
MSH6P52701 U1.34-201ENST00000618578 162 ntBASIC7.46□□□□□ -1.21
MSH6P52701 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
MSH6P52701 U1.31-201ENST00000620022 160 ntBASIC7.46□□□□□ -1.21
MSH6P52701 MVP-219ENST00000629059 120 ntTSL 5 BASIC7.46□□□□□ -1.21
MSH6P52701 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.21
MSH6P52701 SDAD1P1-202ENST00000524156 2051 ntBASIC7.46□□□□□ -1.21
MSH6P52701 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
MSH6P52701 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC7.46□□□□□ -1.21
MSH6P52701 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.46□□□□□ -1.21
MSH6P52701 AL078621.3-201ENST00000623707 2042 ntBASIC7.46□□□□□ -1.21
MSH6P52701 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.46□□□□□ -1.22
MSH6P52701 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
MSH6P52701 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC7.46□□□□□ -1.22
MSH6P52701 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
MSH6P52701 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
MSH6P52701 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
MSH6P52701 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
MSH6P52701 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
MSH6P52701 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
MSH6P52701 Y_RNA.126-201ENST00000363382 111 ntBASIC7.46□□□□□ -1.22
MSH6P52701 AL390879.1-201ENST00000439143 386 ntBASIC7.46□□□□□ -1.22
MSH6P52701 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC7.46□□□□□ -1.22
MSH6P52701 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC7.46□□□□□ -1.22
MSH6P52701 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC7.46□□□□□ -1.22
MSH6P52701 YWHABP2-201ENST00000540201 713 ntBASIC7.46□□□□□ -1.22
MSH6P52701 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC7.46□□□□□ -1.22
MSH6P52701 AL163952.1-202ENST00000569625 600 ntBASIC7.46□□□□□ -1.22
MSH6P52701 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC7.46□□□□□ -1.22
MSH6P52701 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
MSH6P52701 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
MSH6P52701 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
MSH6P52701 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
MSH6P52701 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
MSH6P52701 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
MSH6P52701 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
MSH6P52701 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
MSH6P52701 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC7.45□□□□□ -1.22
MSH6P52701 NXF4-202ENST00000416098 1465 ntBASIC7.45□□□□□ -1.22
MSH6P52701 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
MSH6P52701 RPL17P36-201ENST00000420302 549 ntBASIC7.45□□□□□ -1.22
MSH6P52701 TMEM183AP1-205ENST00000432739 290 ntBASIC7.45□□□□□ -1.22
MSH6P52701 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC7.45□□□□□ -1.22
MSH6P52701 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC7.45□□□□□ -1.22
MSH6P52701 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
MSH6P52701 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
MSH6P52701 BGLT3-201ENST00000564523 994 ntBASIC7.45□□□□□ -1.22
MSH6P52701 MIR1254-2-201ENST00000579553 63 ntBASIC7.45□□□□□ -1.22
MSH6P52701 AC006115.2-201ENST00000596823 202 ntBASIC7.45□□□□□ -1.22
MSH6P52701 RNF138P2-201ENST00000603490 592 ntBASIC7.45□□□□□ -1.22
MSH6P52701 AC007996.1-201ENST00000620414 2821 ntBASIC7.45□□□□□ -1.22
MSH6P52701 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
MSH6P52701 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
MSH6P52701 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
MSH6P52701 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.44□□□□□ -1.22
MSH6P52701 ATP5A1P4-201ENST00000556888 1605 ntBASIC7.44□□□□□ -1.22
MSH6P52701 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.44□□□□□ -1.22
MSH6P52701 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
MSH6P52701 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
MSH6P52701 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
MSH6P52701 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
MSH6P52701 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
MSH6P52701 SNORD1C-201ENST00000363315 78 ntBASIC7.44□□□□□ -1.22
MSH6P52701 AL354868.1-201ENST00000417077 482 ntBASIC7.44□□□□□ -1.22
MSH6P52701 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
MSH6P52701 AC009480.2-201ENST00000422916 432 ntBASIC7.44□□□□□ -1.22
MSH6P52701 AL365220.1-201ENST00000432923 399 ntBASIC7.44□□□□□ -1.22
MSH6P52701 NDUFAF4P2-201ENST00000445374 520 ntBASIC7.44□□□□□ -1.22
MSH6P52701 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC7.44□□□□□ -1.22
MSH6P52701 AC104634.1-201ENST00000452720 462 ntBASIC7.44□□□□□ -1.22
MSH6P52701 AC019193.2-201ENST00000610012 634 ntBASIC7.44□□□□□ -1.22
MSH6P52701 AP000547.3-204ENST00000588548 2523 ntBASIC7.44□□□□□ -1.22
MSH6P52701 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms