Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM23P36406 NANOGP9-201ENST00000439890 892 ntBASIC5.51□□□□□ -1.53
TRIM23P36406 MTCO3P17-201ENST00000443775 513 ntBASIC5.51□□□□□ -1.53
TRIM23P36406 GAPDHP14-201ENST00000450472 937 ntBASIC5.51□□□□□ -1.53
TRIM23P36406 ATP5LP5-201ENST00000483050 299 ntBASIC5.51□□□□□ -1.53
TRIM23P36406 RN7SL214P-201ENST00000487317 265 ntBASIC5.51□□□□□ -1.53
TRIM23P36406 PMS2P3-207ENST00000529061 717 ntBASIC5.51□□□□□ -1.53
TRIM23P36406 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM23P36406 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM23P36406 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM23P36406 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM23P36406 H3F3BP2-201ENST00000583907 357 ntBASIC5.51□□□□□ -1.53
TRIM23P36406 AC060780.2-201ENST00000589047 198 ntBASIC5.51□□□□□ -1.53
TRIM23P36406 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM23P36406 AC096586.2-201ENST00000610260 441 ntBASIC5.51□□□□□ -1.53
TRIM23P36406 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM23P36406 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM23P36406 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM23P36406 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM23P36406 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM23P36406 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM23P36406 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM23P36406 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM23P36406 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM23P36406 Z83820.1-201ENST00000456978 1499 ntBASIC5.51□□□□□ -1.53
TRIM23P36406 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM23P36406 AL929601.4-201ENST00000613011 1341 ntBASIC5.5□□□□□ -1.53
TRIM23P36406 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TRIM23P36406 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM23P36406 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM23P36406 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.5□□□□□ -1.53
TRIM23P36406 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM23P36406 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM23P36406 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM23P36406 RARSP1-201ENST00000542842 1418 ntBASIC5.5□□□□□ -1.53
TRIM23P36406 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
TRIM23P36406 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM23P36406 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
TRIM23P36406 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TRIM23P36406 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM23P36406 AC005042.1-201ENST00000393397 800 ntBASIC5.5□□□□□ -1.53
TRIM23P36406 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM23P36406 AC096921.1-201ENST00000411661 375 ntBASIC5.5□□□□□ -1.53
TRIM23P36406 SETP15-201ENST00000412724 337 ntBASIC5.5□□□□□ -1.53
TRIM23P36406 Z93019.1-201ENST00000416450 973 ntBASIC5.5□□□□□ -1.53
TRIM23P36406 TMEM183AP1-205ENST00000432739 290 ntBASIC5.5□□□□□ -1.53
TRIM23P36406 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM23P36406 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM23P36406 RN7SL51P-201ENST00000468230 285 ntBASIC5.5□□□□□ -1.53
TRIM23P36406 RN7SL188P-201ENST00000469842 285 ntBASIC5.5□□□□□ -1.53
TRIM23P36406 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM23P36406 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM23P36406 AL671862.1-201ENST00000515851 349 ntBASIC5.5□□□□□ -1.53
TRIM23P36406 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM23P36406 OR10D4P-201ENST00000525892 951 ntBASIC5.5□□□□□ -1.53
TRIM23P36406 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.5□□□□□ -1.53
TRIM23P36406 DPRXP4-201ENST00000578053 568 ntBASIC5.5□□□□□ -1.53
TRIM23P36406 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM23P36406 IMMP1LP3-201ENST00000604197 224 ntBASIC5.5□□□□□ -1.53
TRIM23P36406 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM23P36406 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM23P36406 AC000095.2-202ENST00000637415 154 ntBASIC5.5□□□□□ -1.53
TRIM23P36406 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM23P36406 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM23P36406 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM23P36406 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM23P36406 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM23P36406 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM23P36406 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM23P36406 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM23P36406 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM23P36406 MT-RNR2-201ENST00000387347 1559 ntBASIC5.5□□□□□ -1.53
TRIM23P36406 PCAT14-202ENST00000627127 3935 ntBASIC5.5□□□□□ -1.53
TRIM23P36406 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM23P36406 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM23P36406 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
TRIM23P36406 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM23P36406 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM23P36406 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM23P36406 AL513548.1-201ENST00000562904 1724 ntBASIC5.49□□□□□ -1.53
TRIM23P36406 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM23P36406 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
TRIM23P36406 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM23P36406 RNA5SP183-201ENST00000362452 119 ntBASIC5.49□□□□□ -1.53
TRIM23P36406 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TRIM23P36406 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TRIM23P36406 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM23P36406 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM23P36406 METTL15P3-201ENST00000415522 1221 ntBASIC5.49□□□□□ -1.53
TRIM23P36406 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM23P36406 SETP10-201ENST00000424368 814 ntBASIC5.49□□□□□ -1.53
TRIM23P36406 CYCSP12-201ENST00000437729 300 ntBASIC5.49□□□□□ -1.53
TRIM23P36406 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM23P36406 RPL7P45-201ENST00000455851 743 ntBASIC5.49□□□□□ -1.53
TRIM23P36406 SNORD125-201ENST00000459538 96 ntBASIC5.49□□□□□ -1.53
TRIM23P36406 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM23P36406 RN7SL629P-201ENST00000489622 285 ntBASIC5.49□□□□□ -1.53
TRIM23P36406 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM23P36406 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM23P36406 AC078878.1-201ENST00000539832 958 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms