Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CTNNA1P35221 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CTNNA1P35221 AC092376.2-201ENST00000622621 4116 ntBASIC5.87□□□□□ -1.47
CTNNA1P35221 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.87□□□□□ -1.47
CTNNA1P35221 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.87□□□□□ -1.47
CTNNA1P35221 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CTNNA1P35221 TMSB4XP2-201ENST00000335179 210 ntBASIC5.87□□□□□ -1.47
CTNNA1P35221 RNA5SP477-201ENST00000362639 119 ntBASIC5.87□□□□□ -1.47
CTNNA1P35221 RNU6-618P-201ENST00000363518 112 ntBASIC5.87□□□□□ -1.47
CTNNA1P35221 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.87□□□□□ -1.47
CTNNA1P35221 SNORD65-201ENST00000391079 73 ntBASIC5.87□□□□□ -1.47
CTNNA1P35221 RNA5SP431-201ENST00000410312 120 ntBASIC5.87□□□□□ -1.47
CTNNA1P35221 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CTNNA1P35221 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.87□□□□□ -1.47
CTNNA1P35221 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.87□□□□□ -1.47
CTNNA1P35221 AC022022.1-201ENST00000430304 178 ntBASIC5.87□□□□□ -1.47
CTNNA1P35221 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.87□□□□□ -1.47
CTNNA1P35221 AC007679.3-201ENST00000434035 414 ntBASIC5.87□□□□□ -1.47
CTNNA1P35221 AP000936.3-201ENST00000438127 255 ntBASIC5.87□□□□□ -1.47
CTNNA1P35221 AC073465.2-201ENST00000440938 498 ntBASIC5.87□□□□□ -1.47
CTNNA1P35221 BUD31P2-201ENST00000449374 300 ntBASIC5.87□□□□□ -1.47
CTNNA1P35221 AC104339.1-201ENST00000465478 348 ntBASIC5.87□□□□□ -1.47
CTNNA1P35221 RNA5SP438-201ENST00000516561 112 ntBASIC5.87□□□□□ -1.47
CTNNA1P35221 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.87□□□□□ -1.47
CTNNA1P35221 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.87□□□□□ -1.47
CTNNA1P35221 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.87□□□□□ -1.47
CTNNA1P35221 MIR744-201ENST00000578242 98 ntBASIC5.87□□□□□ -1.47
CTNNA1P35221 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.87□□□□□ -1.47
CTNNA1P35221 AC021106.3-201ENST00000623925 531 ntBASIC5.87□□□□□ -1.47
CTNNA1P35221 SAMMSON-209ENST00000641222 1100 ntBASIC5.87□□□□□ -1.47
CTNNA1P35221 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CTNNA1P35221 AL360270.2-201ENST00000562952 5985 ntBASIC5.87□□□□□ -1.47
CTNNA1P35221 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CTNNA1P35221 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CTNNA1P35221 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CTNNA1P35221 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CTNNA1P35221 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.87□□□□□ -1.47
CTNNA1P35221 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.87□□□□□ -1.47
CTNNA1P35221 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
CTNNA1P35221 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
CTNNA1P35221 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CTNNA1P35221 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.87□□□□□ -1.47
CTNNA1P35221 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CTNNA1P35221 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.87□□□□□ -1.47
CTNNA1P35221 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CTNNA1P35221 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CTNNA1P35221 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CTNNA1P35221 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CTNNA1P35221 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CTNNA1P35221 AC006484.1-201ENST00000435086 1884 ntBASIC5.86□□□□□ -1.47
CTNNA1P35221 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.86□□□□□ -1.47
CTNNA1P35221 UGT2B26P-201ENST00000508672 1613 ntBASIC5.86□□□□□ -1.47
CTNNA1P35221 AC110792.3-201ENST00000595906 1614 ntBASIC5.86□□□□□ -1.47
CTNNA1P35221 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CTNNA1P35221 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CTNNA1P35221 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.86□□□□□ -1.47
CTNNA1P35221 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.86□□□□□ -1.47
CTNNA1P35221 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CTNNA1P35221 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CTNNA1P35221 U3.7-201ENST00000363668 216 ntBASIC5.86□□□□□ -1.47
CTNNA1P35221 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CTNNA1P35221 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CTNNA1P35221 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
CTNNA1P35221 AL034403.1-201ENST00000399414 885 ntBASIC5.86□□□□□ -1.47
CTNNA1P35221 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CTNNA1P35221 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.86□□□□□ -1.47
CTNNA1P35221 IGBP1P3-201ENST00000447449 1000 ntBASIC5.86□□□□□ -1.47
CTNNA1P35221 EEF1B2P3-201ENST00000447718 678 ntBASIC5.86□□□□□ -1.47
CTNNA1P35221 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CTNNA1P35221 AC002553.2-201ENST00000453217 340 ntBASIC5.86□□□□□ -1.47
CTNNA1P35221 PSAT1P4-201ENST00000466500 526 ntBASIC5.86□□□□□ -1.47
CTNNA1P35221 AC037198.2-201ENST00000478845 733 ntBASIC5.86□□□□□ -1.47
CTNNA1P35221 RPS3AP15-201ENST00000483874 781 ntBASIC5.86□□□□□ -1.47
CTNNA1P35221 OR5H7P-201ENST00000514084 930 ntBASIC5.86□□□□□ -1.47
CTNNA1P35221 AC079064.1-201ENST00000528365 362 ntBASIC5.86□□□□□ -1.47
CTNNA1P35221 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.86□□□□□ -1.47
CTNNA1P35221 AP002373.2-201ENST00000541631 1060 ntBASIC5.86□□□□□ -1.47
CTNNA1P35221 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
CTNNA1P35221 AC026826.3-201ENST00000561747 158 ntBASIC5.86□□□□□ -1.47
CTNNA1P35221 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.86□□□□□ -1.47
CTNNA1P35221 AC002310.3-201ENST00000569728 723 ntBASIC5.86□□□□□ -1.47
CTNNA1P35221 MIR5010-201ENST00000582846 120 ntBASIC5.86□□□□□ -1.47
CTNNA1P35221 AC005726.4-201ENST00000582858 458 ntBASIC5.86□□□□□ -1.47
CTNNA1P35221 MIR7853-201ENST00000584820 132 ntBASIC5.86□□□□□ -1.47
CTNNA1P35221 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.86□□□□□ -1.47
CTNNA1P35221 AL133370.2-201ENST00000619934 439 ntBASIC5.86□□□□□ -1.47
CTNNA1P35221 MIR6806-201ENST00000622141 64 ntBASIC5.86□□□□□ -1.47
CTNNA1P35221 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.86□□□□□ -1.47
CTNNA1P35221 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.86□□□□□ -1.47
CTNNA1P35221 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.86□□□□□ -1.47
CTNNA1P35221 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.86□□□□□ -1.47
CTNNA1P35221 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CTNNA1P35221 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CTNNA1P35221 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
CTNNA1P35221 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CTNNA1P35221 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.85□□□□□ -1.47
CTNNA1P35221 TRIM51GP-201ENST00000534741 1350 ntBASIC5.85□□□□□ -1.47
CTNNA1P35221 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CTNNA1P35221 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CTNNA1P35221 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms