Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 AC105918.1-201ENST00000474399 838 ntBASIC6.64□□□□□ -1.35
SMARCA1P28370 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SMARCA1P28370 RPL32P33-201ENST00000487023 394 ntBASIC6.64□□□□□ -1.35
SMARCA1P28370 RNU6-615P-201ENST00000516065 106 ntBASIC6.64□□□□□ -1.35
SMARCA1P28370 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.64□□□□□ -1.35
SMARCA1P28370 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.64□□□□□ -1.35
SMARCA1P28370 MRPS16P1-201ENST00000523462 412 ntBASIC6.64□□□□□ -1.35
SMARCA1P28370 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.64□□□□□ -1.35
SMARCA1P28370 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC6.64□□□□□ -1.35
SMARCA1P28370 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.64□□□□□ -1.35
SMARCA1P28370 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.64□□□□□ -1.35
SMARCA1P28370 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.64□□□□□ -1.35
SMARCA1P28370 AC016839.1-201ENST00000578162 867 ntBASIC6.64□□□□□ -1.35
SMARCA1P28370 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.64□□□□□ -1.35
SMARCA1P28370 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.64□□□□□ -1.35
SMARCA1P28370 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.64□□□□□ -1.35
SMARCA1P28370 AC025016.1-201ENST00000616746 682 ntBASIC6.64□□□□□ -1.35
SMARCA1P28370 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SMARCA1P28370 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.64□□□□□ -1.35
SMARCA1P28370 AL445984.1-201ENST00000637834 659 ntBASIC6.64□□□□□ -1.35
SMARCA1P28370 AC087565.3-203ENST00000641018 837 ntBASIC6.64□□□□□ -1.35
SMARCA1P28370 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
SMARCA1P28370 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.64□□□□□ -1.35
SMARCA1P28370 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
SMARCA1P28370 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
SMARCA1P28370 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
SMARCA1P28370 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SMARCA1P28370 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.64□□□□□ -1.35
SMARCA1P28370 AC009962.1-201ENST00000567327 3813 ntBASIC6.64□□□□□ -1.35
SMARCA1P28370 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.64□□□□□ -1.35
SMARCA1P28370 AP004607.3-201ENST00000530354 3915 ntBASIC6.64□□□□□ -1.35
SMARCA1P28370 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
SMARCA1P28370 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
SMARCA1P28370 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SMARCA1P28370 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SMARCA1P28370 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
SMARCA1P28370 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
SMARCA1P28370 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SMARCA1P28370 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.63□□□□□ -1.35
SMARCA1P28370 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
SMARCA1P28370 RNA5SP46-201ENST00000362370 120 ntBASIC6.63□□□□□ -1.35
SMARCA1P28370 RN7SKP186-201ENST00000365371 303 ntBASIC6.63□□□□□ -1.35
SMARCA1P28370 RNU6-650P-201ENST00000365658 111 ntBASIC6.63□□□□□ -1.35
SMARCA1P28370 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SMARCA1P28370 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
SMARCA1P28370 SEPT7P8-201ENST00000413308 775 ntBASIC6.63□□□□□ -1.35
SMARCA1P28370 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.63□□□□□ -1.35
SMARCA1P28370 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.63□□□□□ -1.35
SMARCA1P28370 BX119321.1-201ENST00000428912 797 ntBASIC6.63□□□□□ -1.35
SMARCA1P28370 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.63□□□□□ -1.35
SMARCA1P28370 IMMTP1-201ENST00000435590 2219 ntBASIC6.63□□□□□ -1.35
SMARCA1P28370 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC6.63□□□□□ -1.35
SMARCA1P28370 AC005297.1-201ENST00000444765 862 ntBASIC6.63□□□□□ -1.35
SMARCA1P28370 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SMARCA1P28370 AL606517.1-201ENST00000446914 387 ntBASIC6.63□□□□□ -1.35
SMARCA1P28370 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SMARCA1P28370 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.63□□□□□ -1.35
SMARCA1P28370 AC093663.2-201ENST00000484625 313 ntBASIC6.63□□□□□ -1.35
SMARCA1P28370 AC093815.1-201ENST00000508637 280 ntBASIC6.63□□□□□ -1.35
SMARCA1P28370 FABP5P6-201ENST00000510588 409 ntBASIC6.63□□□□□ -1.35
SMARCA1P28370 HMGB1P47-201ENST00000511281 589 ntBASIC6.63□□□□□ -1.35
SMARCA1P28370 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.63□□□□□ -1.35
SMARCA1P28370 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SMARCA1P28370 AP000619.2-201ENST00000546014 969 ntBASIC6.63□□□□□ -1.35
SMARCA1P28370 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
SMARCA1P28370 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.63□□□□□ -1.35
SMARCA1P28370 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
SMARCA1P28370 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.63□□□□□ -1.35
SMARCA1P28370 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.63□□□□□ -1.35
SMARCA1P28370 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.63□□□□□ -1.35
SMARCA1P28370 AC007842.1-201ENST00000597336 2039 ntBASIC6.63□□□□□ -1.35
SMARCA1P28370 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.63□□□□□ -1.35
SMARCA1P28370 HIRAP1-201ENST00000605318 787 ntBASIC6.63□□□□□ -1.35
SMARCA1P28370 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.63□□□□□ -1.35
SMARCA1P28370 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.63□□□□□ -1.35
SMARCA1P28370 AC007683.2-201ENST00000624681 714 ntBASIC6.63□□□□□ -1.35
SMARCA1P28370 AC010608.3-201ENST00000625048 527 ntBASIC6.63□□□□□ -1.35
SMARCA1P28370 OR4G3P-201ENST00000633500 913 ntBASIC6.63□□□□□ -1.35
SMARCA1P28370 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.63□□□□□ -1.35
SMARCA1P28370 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC6.63□□□□□ -1.35
SMARCA1P28370 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.63□□□□□ -1.35
SMARCA1P28370 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
SMARCA1P28370 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
SMARCA1P28370 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
SMARCA1P28370 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SMARCA1P28370 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SMARCA1P28370 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SMARCA1P28370 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SMARCA1P28370 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
SMARCA1P28370 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SMARCA1P28370 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SMARCA1P28370 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
SMARCA1P28370 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SMARCA1P28370 RNA5SP131-201ENST00000365452 119 ntBASIC6.62□□□□□ -1.35
SMARCA1P28370 RNA5SP30-201ENST00000365552 115 ntBASIC6.62□□□□□ -1.35
SMARCA1P28370 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.62□□□□□ -1.35
SMARCA1P28370 MIR130A-201ENST00000385274 89 ntBASIC6.62□□□□□ -1.35
SMARCA1P28370 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
SMARCA1P28370 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SMARCA1P28370 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms