Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC7.65□□□□□ -1.18
VARSP26640 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC7.65□□□□□ -1.18
VARSP26640 DET1-202ENST00000444300 2154 ntTSL 5 BASIC7.65□□□□□ -1.18
VARSP26640 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC7.65□□□□□ -1.18
VARSP26640 AL139135.2-201ENST00000445040 433 ntBASIC7.65□□□□□ -1.18
VARSP26640 AC079448.1-201ENST00000449377 373 ntBASIC7.65□□□□□ -1.18
VARSP26640 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.65□□□□□ -1.18
VARSP26640 USP9YP23-201ENST00000455085 407 ntBASIC7.65□□□□□ -1.18
VARSP26640 OR7E7P-201ENST00000455678 1012 ntBASIC7.65□□□□□ -1.18
VARSP26640 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
VARSP26640 RPL5P15-201ENST00000475870 897 ntBASIC7.65□□□□□ -1.18
VARSP26640 AC116353.1-201ENST00000489727 316 ntBASIC7.65□□□□□ -1.18
VARSP26640 NPY6R-201ENST00000503807 1112 ntBASIC7.65□□□□□ -1.18
VARSP26640 AC139783.2-201ENST00000504847 1145 ntBASIC7.65□□□□□ -1.18
VARSP26640 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC7.65□□□□□ -1.18
VARSP26640 AC108120.2-201ENST00000512973 294 ntBASIC7.65□□□□□ -1.18
VARSP26640 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
VARSP26640 RNU6-1308P-201ENST00000516817 103 ntBASIC7.65□□□□□ -1.18
VARSP26640 RGS4-207ENST00000527809 817 ntTSL 4 BASIC7.65□□□□□ -1.18
VARSP26640 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC7.65□□□□□ -1.18
VARSP26640 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC7.65□□□□□ -1.18
VARSP26640 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
VARSP26640 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
VARSP26640 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC7.65□□□□□ -1.18
VARSP26640 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC7.65□□□□□ -1.18
VARSP26640 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC7.65□□□□□ -1.18
VARSP26640 IGHV1OR15-4-201ENST00000560037 348 ntBASIC7.65□□□□□ -1.18
VARSP26640 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.65□□□□□ -1.18
VARSP26640 RN7SL376P-201ENST00000578594 264 ntBASIC7.65□□□□□ -1.18
VARSP26640 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC7.65□□□□□ -1.18
VARSP26640 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC7.65□□□□□ -1.18
VARSP26640 AC010719.1-201ENST00000602992 747 ntBASIC7.65□□□□□ -1.18
VARSP26640 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.65□□□□□ -1.18
VARSP26640 PRR13P3-201ENST00000603578 376 ntBASIC7.65□□□□□ -1.18
VARSP26640 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC7.65□□□□□ -1.18
VARSP26640 AC103710.4-201ENST00000609301 899 ntBASIC7.65□□□□□ -1.18
VARSP26640 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.65□□□□□ -1.18
VARSP26640 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
VARSP26640 RPL23AP61-201ENST00000623642 466 ntBASIC7.65□□□□□ -1.18
VARSP26640 AL512662.1-201ENST00000624850 2251 ntBASIC7.65□□□□□ -1.18
VARSP26640 AC006511.3-201ENST00000624929 1783 ntBASIC7.65□□□□□ -1.18
VARSP26640 AC134981.1-201ENST00000628076 348 ntBASIC7.65□□□□□ -1.18
VARSP26640 TPTEP1-208ENST00000636884 213 ntBASIC7.65□□□□□ -1.18
VARSP26640 OR52B5P-204ENST00000641744 3467 ntBASIC7.65□□□□□ -1.18
VARSP26640 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
VARSP26640 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
VARSP26640 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC7.65□□□□□ -1.19
VARSP26640 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
VARSP26640 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC7.65□□□□□ -1.19
VARSP26640 AC007938.1-201ENST00000562524 2902 ntBASIC7.65□□□□□ -1.19
VARSP26640 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.19
VARSP26640 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
VARSP26640 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.64□□□□□ -1.19
VARSP26640 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
VARSP26640 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.64□□□□□ -1.19
VARSP26640 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
VARSP26640 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
VARSP26640 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
VARSP26640 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC7.64□□□□□ -1.19
VARSP26640 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC7.64□□□□□ -1.19
VARSP26640 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
VARSP26640 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.64□□□□□ -1.19
VARSP26640 AC007923.2-201ENST00000584218 1591 ntBASIC7.64□□□□□ -1.19
VARSP26640 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
VARSP26640 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
VARSP26640 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
VARSP26640 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
VARSP26640 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC7.64□□□□□ -1.19
VARSP26640 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
VARSP26640 ZNF37BP-203ENST00000452306 1352 ntBASIC7.64□□□□□ -1.19
VARSP26640 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
VARSP26640 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC7.64□□□□□ -1.19
VARSP26640 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
VARSP26640 Y_RNA.146-201ENST00000363549 102 ntBASIC7.64□□□□□ -1.19
VARSP26640 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
VARSP26640 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
VARSP26640 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC7.64□□□□□ -1.19
VARSP26640 AC073136.2-201ENST00000417282 849 ntBASIC7.64□□□□□ -1.19
VARSP26640 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
VARSP26640 RBMY2FP-202ENST00000420346 1263 ntBASIC7.64□□□□□ -1.19
VARSP26640 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC7.64□□□□□ -1.19
VARSP26640 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC7.64□□□□□ -1.19
VARSP26640 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC7.64□□□□□ -1.19
VARSP26640 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC7.64□□□□□ -1.19
VARSP26640 RPS21P1-201ENST00000434479 247 ntBASIC7.64□□□□□ -1.19
VARSP26640 AL022721.1-201ENST00000436521 505 ntBASIC7.64□□□□□ -1.19
VARSP26640 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC7.64□□□□□ -1.19
VARSP26640 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
VARSP26640 MTND6P13-201ENST00000443510 523 ntBASIC7.64□□□□□ -1.19
VARSP26640 AL022237.1-201ENST00000446663 358 ntBASIC7.64□□□□□ -1.19
VARSP26640 AL590365.1-201ENST00000450788 243 ntBASIC7.64□□□□□ -1.19
VARSP26640 AC114755.1-201ENST00000453101 868 ntBASIC7.64□□□□□ -1.19
VARSP26640 DNAJB5P1-201ENST00000454004 806 ntBASIC7.64□□□□□ -1.19
VARSP26640 C1DP4-201ENST00000455429 424 ntBASIC7.64□□□□□ -1.19
VARSP26640 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC7.64□□□□□ -1.19
VARSP26640 Y_RNA.632-201ENST00000459189 102 ntBASIC7.64□□□□□ -1.19
VARSP26640 RN7SL740P-201ENST00000467060 344 ntBASIC7.64□□□□□ -1.19
VARSP26640 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
VARSP26640 AL355076.1-201ENST00000484315 270 ntBASIC7.64□□□□□ -1.19
VARSP26640 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms