Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SNORA70.11-201ENST00000515987 138 ntBASIC4.58□□□□□ -1.68
CCL1P22362 SNORA70.13-201ENST00000516116 138 ntBASIC4.58□□□□□ -1.68
CCL1P22362 RN7SKP99-201ENST00000517028 307 ntBASIC4.58□□□□□ -1.68
CCL1P22362 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.58□□□□□ -1.68
CCL1P22362 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.58□□□□□ -1.68
CCL1P22362 BLZF2P-201ENST00000553776 1130 ntBASIC4.58□□□□□ -1.68
CCL1P22362 RN7SL708P-201ENST00000580952 299 ntBASIC4.58□□□□□ -1.68
CCL1P22362 MIR4505-201ENST00000582238 73 ntBASIC4.58□□□□□ -1.68
CCL1P22362 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.58□□□□□ -1.68
CCL1P22362 AC008814.1-201ENST00000603797 406 ntBASIC4.58□□□□□ -1.68
CCL1P22362 AC000068.2-201ENST00000608816 460 ntBASIC4.58□□□□□ -1.68
CCL1P22362 AC016542.2-201ENST00000624201 619 ntBASIC4.58□□□□□ -1.68
CCL1P22362 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.58□□□□□ -1.68
CCL1P22362 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCL1P22362 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCL1P22362 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCL1P22362 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCL1P22362 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCL1P22362 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCL1P22362 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCL1P22362 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCL1P22362 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCL1P22362 AC073136.1-201ENST00000449426 2884 ntBASIC4.58□□□□□ -1.68
CCL1P22362 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.58□□□□□ -1.68
CCL1P22362 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCL1P22362 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
CCL1P22362 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCL1P22362 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.57□□□□□ -1.68
CCL1P22362 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCL1P22362 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCL1P22362 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCL1P22362 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCL1P22362 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
CCL1P22362 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CCL1P22362 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.57□□□□□ -1.68
CCL1P22362 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CCL1P22362 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CCL1P22362 RNA5SP234-201ENST00000363916 119 ntBASIC4.57□□□□□ -1.68
CCL1P22362 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CCL1P22362 AL133388.1-201ENST00000404509 287 ntBASIC4.57□□□□□ -1.68
CCL1P22362 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.57□□□□□ -1.68
CCL1P22362 AC117434.1-201ENST00000419971 836 ntBASIC4.57□□□□□ -1.68
CCL1P22362 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.57□□□□□ -1.68
CCL1P22362 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.57□□□□□ -1.68
CCL1P22362 AL161722.2-201ENST00000434731 981 ntBASIC4.57□□□□□ -1.68
CCL1P22362 CYCSP24-201ENST00000445119 316 ntBASIC4.57□□□□□ -1.68
CCL1P22362 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.57□□□□□ -1.68
CCL1P22362 AC094085.1-201ENST00000468914 584 ntBASIC4.57□□□□□ -1.68
CCL1P22362 AC007998.1-201ENST00000474156 672 ntBASIC4.57□□□□□ -1.68
CCL1P22362 COX6B1P2-201ENST00000489624 230 ntBASIC4.57□□□□□ -1.68
CCL1P22362 AC090638.1-201ENST00000498296 909 ntBASIC4.57□□□□□ -1.68
CCL1P22362 SNORD46.2-201ENST00000516021 102 ntBASIC4.57□□□□□ -1.68
CCL1P22362 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.57□□□□□ -1.68
CCL1P22362 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.57□□□□□ -1.68
CCL1P22362 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.57□□□□□ -1.68
CCL1P22362 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CCL1P22362 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.57□□□□□ -1.68
CCL1P22362 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.57□□□□□ -1.68
CCL1P22362 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.57□□□□□ -1.68
CCL1P22362 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.57□□□□□ -1.68
CCL1P22362 LSM1P2-201ENST00000604911 322 ntBASIC4.57□□□□□ -1.68
CCL1P22362 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.57□□□□□ -1.68
CCL1P22362 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CCL1P22362 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCL1P22362 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CCL1P22362 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCL1P22362 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CCL1P22362 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
CCL1P22362 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCL1P22362 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CCL1P22362 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CCL1P22362 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCL1P22362 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.57□□□□□ -1.68
CCL1P22362 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CCL1P22362 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCL1P22362 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.56□□□□□ -1.68
CCL1P22362 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCL1P22362 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.56□□□□□ -1.68
CCL1P22362 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
CCL1P22362 AC020633.1-201ENST00000468439 2247 ntBASIC4.56□□□□□ -1.68
CCL1P22362 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCL1P22362 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCL1P22362 RN7SKP186-201ENST00000365371 303 ntBASIC4.56□□□□□ -1.68
CCL1P22362 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCL1P22362 RNU1-74P-201ENST00000384108 171 ntBASIC4.56□□□□□ -1.68
CCL1P22362 CXADRP1-201ENST00000398098 1095 ntBASIC4.56□□□□□ -1.68
CCL1P22362 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCL1P22362 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
CCL1P22362 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCL1P22362 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.56□□□□□ -1.68
CCL1P22362 CLUHP1-201ENST00000435012 1190 ntBASIC4.56□□□□□ -1.68
CCL1P22362 RPL23AP19-201ENST00000436229 369 ntBASIC4.56□□□□□ -1.68
CCL1P22362 AC064862.4-201ENST00000442180 334 ntBASIC4.56□□□□□ -1.68
CCL1P22362 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.56□□□□□ -1.68
CCL1P22362 AC104634.1-201ENST00000452720 462 ntBASIC4.56□□□□□ -1.68
CCL1P22362 AC245028.2-201ENST00000458673 253 ntBASIC4.56□□□□□ -1.68
CCL1P22362 NDUFA5P5-201ENST00000468361 342 ntBASIC4.56□□□□□ -1.68
CCL1P22362 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCL1P22362 EIF1P7-201ENST00000487533 337 ntBASIC4.56□□□□□ -1.68
CCL1P22362 NPM1P21-201ENST00000513394 762 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms