Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 AC010132.2-201ENST00000295493 1043 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 TMSB4XP4-201ENST00000323496 618 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 RN7SKP185-201ENST00000362813 326 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 RNU11-201ENST00000387069 134 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 SNORA17A-201ENST00000391185 133 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 RPL5P19-201ENST00000404228 893 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 GAPDHP42-201ENST00000406848 981 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 OR2AT2P-201ENST00000413438 905 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 AL158827.1-201ENST00000416300 391 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 RIMKLBP2-201ENST00000424737 654 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 AC104843.2-201ENST00000427666 297 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 BX119321.1-201ENST00000428912 797 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 AC099670.2-201ENST00000435130 321 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 AL450996.1-201ENST00000445574 1202 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 RN7SL188P-201ENST00000469842 285 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 PPIAP19-201ENST00000486414 492 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 RPL7P51-201ENST00000490532 749 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 AK4P6-201ENST00000505168 528 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 RPS27AP18-201ENST00000515536 459 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 SNORA43.3-201ENST00000517240 103 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 AC112191.2-201ENST00000522428 333 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 OR5AM1P-201ENST00000532136 1032 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 MIR3614-201ENST00000581261 86 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 AL360012.1-201ENST00000602813 131 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 AC105105.5-201ENST00000622635 1294 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 SNORA17.5-201ENST00000630429 132 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 AC103703.1-201ENST00000634783 663 ntBASIC5.64□□□□□ -1.51
HLA-DPA1P20036 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DPA1P20036 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 RNA5SP46-201ENST00000362370 120 ntBASIC5.63□□□□□ -1.51
HLA-DPA1P20036 RNA5SP178-201ENST00000410380 128 ntBASIC5.63□□□□□ -1.51
HLA-DPA1P20036 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 AC138761.5-201ENST00000433967 325 ntBASIC5.63□□□□□ -1.51
HLA-DPA1P20036 AL392003.1-201ENST00000434394 243 ntBASIC5.63□□□□□ -1.51
HLA-DPA1P20036 AL161636.2-201ENST00000445179 927 ntBASIC5.63□□□□□ -1.51
HLA-DPA1P20036 RPL36AP39-201ENST00000445859 318 ntBASIC5.63□□□□□ -1.51
HLA-DPA1P20036 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 HMGN1P36-201ENST00000446623 298 ntBASIC5.63□□□□□ -1.51
HLA-DPA1P20036 IGBP1P3-201ENST00000447449 1000 ntBASIC5.63□□□□□ -1.51
HLA-DPA1P20036 PSAT1P4-201ENST00000466500 526 ntBASIC5.63□□□□□ -1.51
HLA-DPA1P20036 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 IGLVIV-64-201ENST00000518581 301 ntBASIC5.63□□□□□ -1.51
HLA-DPA1P20036 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 IGKV3D-34-201ENST00000522638 302 ntBASIC5.63□□□□□ -1.51
HLA-DPA1P20036 OR4A17P-201ENST00000526032 904 ntBASIC5.63□□□□□ -1.51
HLA-DPA1P20036 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 AC010547.6-201ENST00000571789 193 ntBASIC5.63□□□□□ -1.51
HLA-DPA1P20036 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 AC025574.2-201ENST00000615621 514 ntBASIC5.63□□□□□ -1.51
HLA-DPA1P20036 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 AP001153.1-201ENST00000641024 338 ntBASIC5.63□□□□□ -1.51
HLA-DPA1P20036 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
HLA-DPA1P20036 AC083899.1-201ENST00000454465 3819 ntBASIC5.63□□□□□ -1.51
HLA-DPA1P20036 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms