Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
NFKB1P19838 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NFKB1P19838 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.19□□□□□ -1.26
NFKB1P19838 CASC19-280ENST00000642102 1351 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NFKB1P19838 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.18□□□□□ -1.26
NFKB1P19838 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NFKB1P19838 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NFKB1P19838 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NFKB1P19838 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.18□□□□□ -1.26
NFKB1P19838 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.18□□□□□ -1.26
NFKB1P19838 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NFKB1P19838 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
NFKB1P19838 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
NFKB1P19838 CR383658.2-201ENST00000547576 1525 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NFKB1P19838 AC089998.1-201ENST00000548575 3141 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NFKB1P19838 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NFKB1P19838 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NFKB1P19838 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.18□□□□□ -1.26
NFKB1P19838 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC7.18□□□□□ -1.26
NFKB1P19838 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
NFKB1P19838 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
NFKB1P19838 ESD-201ENST00000378697 1079 ntTSL 5 BASIC7.18□□□□□ -1.26
NFKB1P19838 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.18□□□□□ -1.26
NFKB1P19838 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.18□□□□□ -1.26
NFKB1P19838 Y_RNA.509-201ENST00000384506 99 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 RPS3AP5-201ENST00000389400 821 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 CYCSP45-201ENST00000402289 315 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.18□□□□□ -1.26
NFKB1P19838 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.18□□□□□ -1.26
NFKB1P19838 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NFKB1P19838 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC7.18□□□□□ -1.26
NFKB1P19838 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC7.18□□□□□ -1.26
NFKB1P19838 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.18□□□□□ -1.26
NFKB1P19838 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC7.18□□□□□ -1.26
NFKB1P19838 PTP4A1P1-201ENST00000420539 515 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC7.18□□□□□ -1.26
NFKB1P19838 Z68868.1-201ENST00000429048 544 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC7.18□□□□□ -1.26
NFKB1P19838 SUMO2P8-201ENST00000434672 286 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 RPL29P7-201ENST00000440227 457 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC7.18□□□□□ -1.26
NFKB1P19838 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC7.18□□□□□ -1.26
NFKB1P19838 AC005002.1-201ENST00000447458 540 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC7.18□□□□□ -1.26
NFKB1P19838 RPL23AP35-201ENST00000451906 501 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC7.18□□□□□ -1.26
NFKB1P19838 BZW1P1-201ENST00000454901 1240 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 AC135721.2-201ENST00000464237 300 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 AL928654.1-201ENST00000476081 354 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 AC079841.1-201ENST00000481228 950 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 ACTG1P13-201ENST00000486987 1043 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 RPS4XP15-201ENST00000489210 795 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 RPL7P24-201ENST00000493052 752 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 NACAP6-201ENST00000509572 622 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 AC010342.1-201ENST00000514047 877 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC7.18□□□□□ -1.26
NFKB1P19838 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC7.18□□□□□ -1.26
NFKB1P19838 CA1-215ENST00000522389 551 ntTSL 3 BASIC7.18□□□□□ -1.26
NFKB1P19838 AC123904.3-201ENST00000547218 814 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC7.18□□□□□ -1.26
NFKB1P19838 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC7.18□□□□□ -1.26
NFKB1P19838 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.18□□□□□ -1.26
NFKB1P19838 AL049870.4-201ENST00000555741 486 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.18□□□□□ -1.26
NFKB1P19838 AL132640.2-202ENST00000559732 614 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 AL031846.1-201ENST00000560933 314 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC7.18□□□□□ -1.26
NFKB1P19838 AC091489.2-201ENST00000566263 604 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 MIR1273F-201ENST00000580581 99 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC7.18□□□□□ -1.26
NFKB1P19838 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC7.18□□□□□ -1.26
NFKB1P19838 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 AL049634.3-201ENST00000604968 457 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 AC055876.5-201ENST00000605667 259 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC7.18□□□□□ -1.26
NFKB1P19838 AC091834.1-201ENST00000614543 472 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 RPL23AP61-201ENST00000623642 466 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 AC024023.1-201ENST00000624530 922 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC7.18□□□□□ -1.26
NFKB1P19838 SEC63P2-201ENST00000503863 1939 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
NFKB1P19838 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NFKB1P19838 AC110716.2-201ENST00000563865 3945 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NFKB1P19838 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.18□□□□□ -1.26
NFKB1P19838 AC117409.1-201ENST00000470499 1310 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 AC109315.1-201ENST00000584143 1347 ntBASIC7.18□□□□□ -1.26
NFKB1P19838 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.18□□□□□ -1.26
NFKB1P19838 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
NFKB1P19838 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
NFKB1P19838 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NFKB1P19838 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NFKB1P19838 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NFKB1P19838 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
NFKB1P19838 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NFKB1P19838 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC7.17□□□□□ -1.26
NFKB1P19838 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms