Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.46□□□□□ -1.54
XRCC1P18887 DHFRP1-201ENST00000579682 559 ntBASIC5.46□□□□□ -1.54
XRCC1P18887 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
XRCC1P18887 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
XRCC1P18887 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.46□□□□□ -1.54
XRCC1P18887 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
XRCC1P18887 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.46□□□□□ -1.54
XRCC1P18887 AP000864.1-201ENST00000609424 650 ntBASIC5.46□□□□□ -1.54
XRCC1P18887 AL354950.1-201ENST00000614150 568 ntBASIC5.46□□□□□ -1.54
XRCC1P18887 AC007204.2-201ENST00000615022 616 ntBASIC5.46□□□□□ -1.54
XRCC1P18887 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
XRCC1P18887 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
XRCC1P18887 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.46□□□□□ -1.54
XRCC1P18887 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.46□□□□□ -1.54
XRCC1P18887 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.46□□□□□ -1.54
XRCC1P18887 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.46□□□□□ -1.54
XRCC1P18887 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
XRCC1P18887 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
XRCC1P18887 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
XRCC1P18887 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
XRCC1P18887 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
XRCC1P18887 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
XRCC1P18887 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
XRCC1P18887 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
XRCC1P18887 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.45□□□□□ -1.54
XRCC1P18887 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.45□□□□□ -1.54
XRCC1P18887 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
XRCC1P18887 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
XRCC1P18887 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.45□□□□□ -1.54
XRCC1P18887 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
XRCC1P18887 GAPDHP24-201ENST00000328713 983 ntBASIC5.45□□□□□ -1.54
XRCC1P18887 RNA5SP319-201ENST00000362768 119 ntBASIC5.45□□□□□ -1.54
XRCC1P18887 RN7SKP6-201ENST00000364795 319 ntBASIC5.45□□□□□ -1.54
XRCC1P18887 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
XRCC1P18887 AC005042.1-201ENST00000393397 800 ntBASIC5.45□□□□□ -1.54
XRCC1P18887 AL009179.1-201ENST00000406085 265 ntBASIC5.45□□□□□ -1.54
XRCC1P18887 AL596266.1-201ENST00000448132 400 ntBASIC5.45□□□□□ -1.54
XRCC1P18887 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.45□□□□□ -1.54
XRCC1P18887 RPL35AP19-201ENST00000469425 329 ntBASIC5.45□□□□□ -1.54
XRCC1P18887 RN7SL583P-201ENST00000475692 287 ntBASIC5.45□□□□□ -1.54
XRCC1P18887 EIF1P7-201ENST00000487533 337 ntBASIC5.45□□□□□ -1.54
XRCC1P18887 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.45□□□□□ -1.54
XRCC1P18887 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.45□□□□□ -1.54
XRCC1P18887 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.45□□□□□ -1.54
XRCC1P18887 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.45□□□□□ -1.54
XRCC1P18887 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
XRCC1P18887 AL139124.1-201ENST00000609123 421 ntBASIC5.45□□□□□ -1.54
XRCC1P18887 AC025574.2-201ENST00000615621 514 ntBASIC5.45□□□□□ -1.54
XRCC1P18887 MIR8080-201ENST00000622224 89 ntBASIC5.45□□□□□ -1.54
XRCC1P18887 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.45□□□□□ -1.54
XRCC1P18887 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
XRCC1P18887 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
XRCC1P18887 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.45□□□□□ -1.54
XRCC1P18887 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
XRCC1P18887 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.45□□□□□ -1.54
XRCC1P18887 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.45□□□□□ -1.54
XRCC1P18887 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
XRCC1P18887 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.45□□□□□ -1.54
XRCC1P18887 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
XRCC1P18887 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
XRCC1P18887 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
XRCC1P18887 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
XRCC1P18887 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.44□□□□□ -1.54
XRCC1P18887 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
XRCC1P18887 AC005005.4-201ENST00000623789 16698 ntBASIC5.44□□□□□ -1.54
XRCC1P18887 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.44□□□□□ -1.54
XRCC1P18887 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
XRCC1P18887 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
XRCC1P18887 AL121886.1-201ENST00000358609 435 ntBASIC5.44□□□□□ -1.54
XRCC1P18887 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
XRCC1P18887 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
XRCC1P18887 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.44□□□□□ -1.54
XRCC1P18887 NPM1P4-201ENST00000414095 812 ntBASIC5.44□□□□□ -1.54
XRCC1P18887 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
XRCC1P18887 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.44□□□□□ -1.54
XRCC1P18887 MARK2P12-201ENST00000420129 585 ntBASIC5.44□□□□□ -1.54
XRCC1P18887 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.44□□□□□ -1.54
XRCC1P18887 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.44□□□□□ -1.54
XRCC1P18887 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.44□□□□□ -1.54
XRCC1P18887 TAAR4P-201ENST00000454843 1039 ntBASIC5.44□□□□□ -1.54
XRCC1P18887 AL133445.1-201ENST00000467051 452 ntBASIC5.44□□□□□ -1.54
XRCC1P18887 AC100832.1-201ENST00000471945 383 ntBASIC5.44□□□□□ -1.54
XRCC1P18887 AC090638.1-201ENST00000498296 909 ntBASIC5.44□□□□□ -1.54
XRCC1P18887 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.44□□□□□ -1.54
XRCC1P18887 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
XRCC1P18887 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.44□□□□□ -1.54
XRCC1P18887 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.44□□□□□ -1.54
XRCC1P18887 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.44□□□□□ -1.54
XRCC1P18887 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.44□□□□□ -1.54
XRCC1P18887 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.44□□□□□ -1.54
XRCC1P18887 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.44□□□□□ -1.54
XRCC1P18887 AC068870.1-201ENST00000563737 2455 ntBASIC5.44□□□□□ -1.54
XRCC1P18887 H3F3BP2-201ENST00000583907 357 ntBASIC5.44□□□□□ -1.54
XRCC1P18887 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.44□□□□□ -1.54
XRCC1P18887 AC012616.1-201ENST00000600294 197 ntBASIC5.44□□□□□ -1.54
XRCC1P18887 AC008833.1-201ENST00000611633 691 ntBASIC5.44□□□□□ -1.54
XRCC1P18887 AL512624.1-201ENST00000613638 469 ntBASIC5.44□□□□□ -1.54
XRCC1P18887 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
XRCC1P18887 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.44□□□□□ -1.54
XRCC1P18887 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms