Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 RPS4XP12-201ENST00000461747 709 ntBASIC5.63□□□□□ -1.51
VCLP18206 HMGN1P8-201ENST00000463578 288 ntBASIC5.63□□□□□ -1.51
VCLP18206 UBFD1P1-201ENST00000473259 814 ntBASIC5.63□□□□□ -1.51
VCLP18206 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VCLP18206 AC009120.1-201ENST00000493458 473 ntBASIC5.63□□□□□ -1.51
VCLP18206 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.63□□□□□ -1.51
VCLP18206 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.63□□□□□ -1.51
VCLP18206 AC139365.2-201ENST00000517972 253 ntBASIC5.63□□□□□ -1.51
VCLP18206 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VCLP18206 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.63□□□□□ -1.51
VCLP18206 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.63□□□□□ -1.51
VCLP18206 AL121839.1-201ENST00000556233 1185 ntBASIC5.63□□□□□ -1.51
VCLP18206 AC096996.1-201ENST00000563813 325 ntBASIC5.63□□□□□ -1.51
VCLP18206 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VCLP18206 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.63□□□□□ -1.51
VCLP18206 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.63□□□□□ -1.51
VCLP18206 AC002044.3-201ENST00000623314 541 ntBASIC5.63□□□□□ -1.51
VCLP18206 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.63□□□□□ -1.51
VCLP18206 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VCLP18206 MTND5P23-201ENST00000430812 1655 ntBASIC5.63□□□□□ -1.51
VCLP18206 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VCLP18206 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
VCLP18206 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
VCLP18206 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.62□□□□□ -1.51
VCLP18206 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VCLP18206 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.62□□□□□ -1.51
VCLP18206 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VCLP18206 RNU6-697P-201ENST00000363348 107 ntBASIC5.62□□□□□ -1.51
VCLP18206 RNU1-136P-201ENST00000384181 164 ntBASIC5.62□□□□□ -1.51
VCLP18206 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VCLP18206 AC234781.4-201ENST00000419384 244 ntBASIC5.62□□□□□ -1.51
VCLP18206 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.62□□□□□ -1.51
VCLP18206 AC113412.1-201ENST00000425840 504 ntBASIC5.62□□□□□ -1.51
VCLP18206 HMGB1P32-201ENST00000425971 565 ntBASIC5.62□□□□□ -1.51
VCLP18206 Z84478.1-201ENST00000438230 1219 ntBASIC5.62□□□□□ -1.51
VCLP18206 AC092106.1-201ENST00000444291 373 ntBASIC5.62□□□□□ -1.51
VCLP18206 AL450996.1-201ENST00000445574 1202 ntBASIC5.62□□□□□ -1.51
VCLP18206 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.62□□□□□ -1.51
VCLP18206 SEPT7P6-201ENST00000469999 1143 ntBASIC5.62□□□□□ -1.51
VCLP18206 RPS3AP15-201ENST00000483874 781 ntBASIC5.62□□□□□ -1.51
VCLP18206 RPS7P6-201ENST00000485777 579 ntBASIC5.62□□□□□ -1.51
VCLP18206 EIF3LP3-201ENST00000495197 822 ntBASIC5.62□□□□□ -1.51
VCLP18206 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.62□□□□□ -1.51
VCLP18206 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.62□□□□□ -1.51
VCLP18206 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VCLP18206 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.62□□□□□ -1.51
VCLP18206 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.62□□□□□ -1.51
VCLP18206 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.62□□□□□ -1.51
VCLP18206 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.62□□□□□ -1.51
VCLP18206 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.62□□□□□ -1.51
VCLP18206 TRAV11-201ENST00000539512 339 ntBASIC5.62□□□□□ -1.51
VCLP18206 EIF1AXP2-201ENST00000555940 413 ntBASIC5.62□□□□□ -1.51
VCLP18206 AL049872.1-201ENST00000556323 322 ntBASIC5.62□□□□□ -1.51
VCLP18206 OR7M1P-201ENST00000608946 533 ntBASIC5.62□□□□□ -1.51
VCLP18206 AL035661.1-201ENST00000620459 1144 ntBASIC5.62□□□□□ -1.51
VCLP18206 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.62□□□□□ -1.51
VCLP18206 MIR4302-201ENST00000638058 60 ntBASIC5.62□□□□□ -1.51
VCLP18206 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
VCLP18206 AC073869.7-201ENST00000640874 297 ntBASIC5.62□□□□□ -1.51
VCLP18206 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
VCLP18206 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.62□□□□□ -1.51
VCLP18206 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VCLP18206 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
VCLP18206 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VCLP18206 AC245100.2-201ENST00000454544 1679 ntBASIC5.62□□□□□ -1.51
VCLP18206 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.62□□□□□ -1.51
VCLP18206 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VCLP18206 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
VCLP18206 AL159987.1-201ENST00000347911 293 ntBASIC5.61□□□□□ -1.51
VCLP18206 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
VCLP18206 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
VCLP18206 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
VCLP18206 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VCLP18206 RNF10P1-201ENST00000418589 369 ntBASIC5.61□□□□□ -1.51
VCLP18206 OR10T1P-201ENST00000424327 947 ntBASIC5.61□□□□□ -1.51
VCLP18206 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.61□□□□□ -1.51
VCLP18206 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.61□□□□□ -1.51
VCLP18206 UBE2V2P3-201ENST00000433562 437 ntBASIC5.61□□□□□ -1.51
VCLP18206 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.61□□□□□ -1.51
VCLP18206 AC005297.1-201ENST00000444765 862 ntBASIC5.61□□□□□ -1.51
VCLP18206 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.61□□□□□ -1.51
VCLP18206 AC239798.3-201ENST00000454459 408 ntBASIC5.61□□□□□ -1.51
VCLP18206 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.61□□□□□ -1.51
VCLP18206 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.61□□□□□ -1.51
VCLP18206 RPS23P6-201ENST00000466136 431 ntBASIC5.61□□□□□ -1.51
VCLP18206 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VCLP18206 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.61□□□□□ -1.51
VCLP18206 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.61□□□□□ -1.51
VCLP18206 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
VCLP18206 SNORA43.3-201ENST00000517240 103 ntBASIC5.61□□□□□ -1.51
VCLP18206 IGKV3D-34-201ENST00000522638 302 ntBASIC5.61□□□□□ -1.51
VCLP18206 IGLV3-30-201ENST00000524362 298 ntBASIC5.61□□□□□ -1.51
VCLP18206 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.61□□□□□ -1.51
VCLP18206 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.61□□□□□ -1.51
VCLP18206 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.61□□□□□ -1.51
VCLP18206 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.61□□□□□ -1.51
VCLP18206 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.61□□□□□ -1.51
VCLP18206 AC009303.3-201ENST00000591103 736 ntBASIC5.61□□□□□ -1.51
VCLP18206 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
VCLP18206 AC008833.1-201ENST00000611633 691 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms