Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRT3P12035 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.74□□□□□ -1.49
KRT3P12035 TMSB4XP4-201ENST00000323496 618 ntBASIC5.74□□□□□ -1.49
KRT3P12035 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.74□□□□□ -1.49
KRT3P12035 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRT3P12035 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
KRT3P12035 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.74□□□□□ -1.49
KRT3P12035 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.74□□□□□ -1.49
KRT3P12035 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRT3P12035 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.74□□□□□ -1.49
KRT3P12035 RPS27AP6-201ENST00000427962 448 ntBASIC5.74□□□□□ -1.49
KRT3P12035 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.74□□□□□ -1.49
KRT3P12035 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.74□□□□□ -1.49
KRT3P12035 RPS29P14-201ENST00000431518 171 ntBASIC5.74□□□□□ -1.49
KRT3P12035 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.74□□□□□ -1.49
KRT3P12035 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.74□□□□□ -1.49
KRT3P12035 YWHAEP1-201ENST00000453697 763 ntBASIC5.74□□□□□ -1.49
KRT3P12035 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.74□□□□□ -1.49
KRT3P12035 AC109464.1-201ENST00000511091 819 ntBASIC5.74□□□□□ -1.49
KRT3P12035 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.74□□□□□ -1.49
KRT3P12035 MTND6P2-201ENST00000512226 524 ntBASIC5.74□□□□□ -1.49
KRT3P12035 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.74□□□□□ -1.49
KRT3P12035 RN7SKP99-201ENST00000517028 307 ntBASIC5.74□□□□□ -1.49
KRT3P12035 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.74□□□□□ -1.49
KRT3P12035 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.74□□□□□ -1.49
KRT3P12035 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.74□□□□□ -1.49
KRT3P12035 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
KRT3P12035 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.74□□□□□ -1.49
KRT3P12035 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.74□□□□□ -1.49
KRT3P12035 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.74□□□□□ -1.49
KRT3P12035 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.74□□□□□ -1.49
KRT3P12035 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.74□□□□□ -1.49
KRT3P12035 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRT3P12035 FO393422.1-201ENST00000603908 708 ntBASIC5.74□□□□□ -1.49
KRT3P12035 SNORA35B-201ENST00000607417 129 ntBASIC5.74□□□□□ -1.49
KRT3P12035 AC010632.3-201ENST00000611377 369 ntBASIC5.74□□□□□ -1.49
KRT3P12035 RN7SL787P-201ENST00000613000 284 ntBASIC5.74□□□□□ -1.49
KRT3P12035 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.74□□□□□ -1.49
KRT3P12035 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRT3P12035 AC097063.1-201ENST00000426714 1797 ntBASIC5.74□□□□□ -1.49
KRT3P12035 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
KRT3P12035 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRT3P12035 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRT3P12035 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
KRT3P12035 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.74□□□□□ -1.49
KRT3P12035 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRT3P12035 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.74□□□□□ -1.49
KRT3P12035 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRT3P12035 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
KRT3P12035 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
KRT3P12035 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KRT3P12035 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRT3P12035 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRT3P12035 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
KRT3P12035 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KRT3P12035 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
KRT3P12035 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
KRT3P12035 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRT3P12035 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.73□□□□□ -1.49
KRT3P12035 AL031985.1-201ENST00000392713 418 ntBASIC5.73□□□□□ -1.49
KRT3P12035 Z93019.1-201ENST00000416450 973 ntBASIC5.73□□□□□ -1.49
KRT3P12035 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.73□□□□□ -1.49
KRT3P12035 AL161636.2-201ENST00000445179 927 ntBASIC5.73□□□□□ -1.49
KRT3P12035 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.73□□□□□ -1.49
KRT3P12035 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.73□□□□□ -1.49
KRT3P12035 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.73□□□□□ -1.49
KRT3P12035 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.73□□□□□ -1.49
KRT3P12035 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.73□□□□□ -1.49
KRT3P12035 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.73□□□□□ -1.49
KRT3P12035 AC090568.1-201ENST00000509499 856 ntBASIC5.73□□□□□ -1.49
KRT3P12035 SCARNA20.4-201ENST00000516969 131 ntBASIC5.73□□□□□ -1.49
KRT3P12035 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.73□□□□□ -1.49
KRT3P12035 AC027026.1-201ENST00000532323 742 ntBASIC5.73□□□□□ -1.49
KRT3P12035 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.73□□□□□ -1.49
KRT3P12035 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.73□□□□□ -1.49
KRT3P12035 MIR1273E-201ENST00000581165 102 ntBASIC5.73□□□□□ -1.49
KRT3P12035 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.73□□□□□ -1.49
KRT3P12035 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.73□□□□□ -1.49
KRT3P12035 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.73□□□□□ -1.49
KRT3P12035 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.73□□□□□ -1.49
KRT3P12035 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.73□□□□□ -1.49
KRT3P12035 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.73□□□□□ -1.49
KRT3P12035 AL162574.1-201ENST00000615702 950 ntBASIC5.73□□□□□ -1.49
KRT3P12035 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.73□□□□□ -1.49
KRT3P12035 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.73□□□□□ -1.49
KRT3P12035 AP001962.1-201ENST00000624114 559 ntBASIC5.73□□□□□ -1.49
KRT3P12035 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.73□□□□□ -1.49
KRT3P12035 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.73□□□□□ -1.49
KRT3P12035 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
KRT3P12035 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KRT3P12035 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
KRT3P12035 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRT3P12035 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
KRT3P12035 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KRT3P12035 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.73□□□□□ -1.49
KRT3P12035 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRT3P12035 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRT3P12035 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRT3P12035 AC003973.3-201ENST00000624863 2822 ntBASIC5.72□□□□□ -1.49
KRT3P12035 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms