Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTSDP07339 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.47□□□□□ -1.69
CTSDP07339 MTND6P12-201ENST00000428247 522 ntBASIC4.47□□□□□ -1.69
CTSDP07339 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.47□□□□□ -1.69
CTSDP07339 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.47□□□□□ -1.69
CTSDP07339 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.47□□□□□ -1.69
CTSDP07339 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.47□□□□□ -1.69
CTSDP07339 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC4.47□□□□□ -1.69
CTSDP07339 NIFKP7-201ENST00000503365 834 ntBASIC4.47□□□□□ -1.69
CTSDP07339 NENFP3-201ENST00000503735 313 ntBASIC4.47□□□□□ -1.69
CTSDP07339 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.47□□□□□ -1.69
CTSDP07339 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.47□□□□□ -1.69
CTSDP07339 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.47□□□□□ -1.69
CTSDP07339 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.47□□□□□ -1.69
CTSDP07339 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.47□□□□□ -1.69
CTSDP07339 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.47□□□□□ -1.69
CTSDP07339 AC127381.1-201ENST00000555979 939 ntBASIC4.47□□□□□ -1.69
CTSDP07339 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.47□□□□□ -1.69
CTSDP07339 AC009027.1-201ENST00000604510 479 ntBASIC4.47□□□□□ -1.69
CTSDP07339 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.47□□□□□ -1.69
CTSDP07339 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.47□□□□□ -1.69
CTSDP07339 AL390318.1-201ENST00000624564 687 ntBASIC4.47□□□□□ -1.69
CTSDP07339 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.47□□□□□ -1.69
CTSDP07339 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.47□□□□□ -1.69
CTSDP07339 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CTSDP07339 AC073869.10-201ENST00000642016 354 ntBASIC4.47□□□□□ -1.69
CTSDP07339 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTSDP07339 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTSDP07339 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTSDP07339 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.47□□□□□ -1.69
CTSDP07339 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTSDP07339 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
CTSDP07339 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTSDP07339 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.46□□□□□ -1.69
CTSDP07339 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.69
CTSDP07339 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CTSDP07339 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CTSDP07339 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CTSDP07339 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTSDP07339 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CTSDP07339 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTSDP07339 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CTSDP07339 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTSDP07339 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CTSDP07339 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.46□□□□□ -1.7
CTSDP07339 RPL10P10-201ENST00000403509 664 ntBASIC4.46□□□□□ -1.7
CTSDP07339 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.46□□□□□ -1.7
CTSDP07339 NANOGP4-201ENST00000427230 913 ntBASIC4.46□□□□□ -1.7
CTSDP07339 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.46□□□□□ -1.7
CTSDP07339 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.46□□□□□ -1.7
CTSDP07339 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.46□□□□□ -1.7
CTSDP07339 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.46□□□□□ -1.7
CTSDP07339 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.46□□□□□ -1.7
CTSDP07339 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.46□□□□□ -1.7
CTSDP07339 ACA64.1-201ENST00000459171 127 ntBASIC4.46□□□□□ -1.7
CTSDP07339 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CTSDP07339 RN7SL814P-201ENST00000487715 300 ntBASIC4.46□□□□□ -1.7
CTSDP07339 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTSDP07339 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.46□□□□□ -1.7
CTSDP07339 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.46□□□□□ -1.7
CTSDP07339 GOLGA5P1-201ENST00000507317 980 ntBASIC4.46□□□□□ -1.7
CTSDP07339 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CTSDP07339 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.46□□□□□ -1.7
CTSDP07339 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.46□□□□□ -1.7
CTSDP07339 RN7SL356P-201ENST00000582228 248 ntBASIC4.46□□□□□ -1.7
CTSDP07339 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.46□□□□□ -1.7
CTSDP07339 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.46□□□□□ -1.7
CTSDP07339 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.46□□□□□ -1.7
CTSDP07339 AC079315.1-201ENST00000602952 623 ntBASIC4.46□□□□□ -1.7
CTSDP07339 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.46□□□□□ -1.7
CTSDP07339 OR8A1-204ENST00000642111 1145 ntBASIC4.46□□□□□ -1.7
CTSDP07339 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
CTSDP07339 AL731566.1-201ENST00000620490 1937 ntBASIC4.46□□□□□ -1.7
CTSDP07339 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
CTSDP07339 AC063923.1-201ENST00000478982 1619 ntBASIC4.46□□□□□ -1.7
CTSDP07339 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CTSDP07339 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.46□□□□□ -1.7
CTSDP07339 AL450345.1-202ENST00000605741 3881 ntBASIC4.46□□□□□ -1.7
CTSDP07339 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTSDP07339 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTSDP07339 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTSDP07339 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.45□□□□□ -1.7
CTSDP07339 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
CTSDP07339 AC133552.1-201ENST00000569988 4007 ntBASIC4.45□□□□□ -1.7
CTSDP07339 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTSDP07339 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.45□□□□□ -1.7
CTSDP07339 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.45□□□□□ -1.7
CTSDP07339 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.45□□□□□ -1.7
CTSDP07339 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.45□□□□□ -1.7
CTSDP07339 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.45□□□□□ -1.7
CTSDP07339 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.45□□□□□ -1.7
CTSDP07339 AC092754.1-201ENST00000472975 479 ntBASIC4.45□□□□□ -1.7
CTSDP07339 CBX1P5-201ENST00000475330 559 ntBASIC4.45□□□□□ -1.7
CTSDP07339 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
CTSDP07339 AC025458.1-201ENST00000506046 166 ntBASIC4.45□□□□□ -1.7
CTSDP07339 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.45□□□□□ -1.7
CTSDP07339 OR5H7P-201ENST00000514084 930 ntBASIC4.45□□□□□ -1.7
CTSDP07339 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.45□□□□□ -1.7
CTSDP07339 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.45□□□□□ -1.7
CTSDP07339 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms