Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC6.65□□□□□ -1.34
HLA-DOAP06340 RN7SL339P-201ENST00000580597 296 ntBASIC6.65□□□□□ -1.34
HLA-DOAP06340 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.65□□□□□ -1.34
HLA-DOAP06340 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.65□□□□□ -1.34
HLA-DOAP06340 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC6.65□□□□□ -1.34
HLA-DOAP06340 CR589904.2-201ENST00000612533 440 ntBASIC6.65□□□□□ -1.34
HLA-DOAP06340 AL118522.2-201ENST00000616045 615 ntBASIC6.65□□□□□ -1.34
HLA-DOAP06340 AL596275.2-208ENST00000641192 594 ntBASIC6.65□□□□□ -1.34
HLA-DOAP06340 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.65□□□□□ -1.35
HLA-DOAP06340 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HLA-DOAP06340 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.65□□□□□ -1.35
HLA-DOAP06340 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
HLA-DOAP06340 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HLA-DOAP06340 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
HLA-DOAP06340 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
HLA-DOAP06340 AC011504.1-201ENST00000623331 4103 ntBASIC6.65□□□□□ -1.35
HLA-DOAP06340 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HLA-DOAP06340 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
HLA-DOAP06340 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
HLA-DOAP06340 AC025470.1-201ENST00000510053 2032 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HLA-DOAP06340 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
HLA-DOAP06340 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
HLA-DOAP06340 RN7SKP6-201ENST00000364795 319 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 MIR7-1-201ENST00000384871 110 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 UQCRFS1P3-201ENST00000407697 385 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 AL358178.1-201ENST00000407698 397 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 AC092447.3-201ENST00000426027 686 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 AL627308.1-201ENST00000435693 821 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 OR6D1P-201ENST00000436165 939 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 CYCSP12-201ENST00000437729 300 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.64□□□□□ -1.35
HLA-DOAP06340 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.64□□□□□ -1.35
HLA-DOAP06340 RPL7P45-201ENST00000455851 743 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC6.64□□□□□ -1.35
HLA-DOAP06340 AC108751.3-201ENST00000461814 1020 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HLA-DOAP06340 RN7SL799P-201ENST00000475891 298 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 RPS7P6-201ENST00000485777 579 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 RN7SL30P-201ENST00000488416 306 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 AC027338.1-201ENST00000514840 825 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 RN7SKP253-201ENST00000516424 309 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.64□□□□□ -1.35
HLA-DOAP06340 AC068339.2-201ENST00000534395 618 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 AC139103.1-201ENST00000534696 1030 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 AC139697.1-201ENST00000548429 745 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 AC004825.1-201ENST00000555068 586 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.64□□□□□ -1.35
HLA-DOAP06340 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.64□□□□□ -1.35
HLA-DOAP06340 BNIP3P38-201ENST00000601117 544 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 AC025574.2-201ENST00000615621 514 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 AL138955.1-201ENST00000622881 1040 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 AC099654.8-201ENST00000637757 681 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 AC132825.8-201ENST00000640783 297 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
HLA-DOAP06340 AC235565.1-201ENST00000456962 1325 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 AC068733.2-201ENST00000605434 1418 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 AL590763.1-201ENST00000398297 1545 ntBASIC6.64□□□□□ -1.35
HLA-DOAP06340 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HLA-DOAP06340 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.64□□□□□ -1.35
HLA-DOAP06340 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.64□□□□□ -1.35
HLA-DOAP06340 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.64□□□□□ -1.35
HLA-DOAP06340 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HLA-DOAP06340 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-DOAP06340 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-DOAP06340 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-DOAP06340 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-DOAP06340 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-DOAP06340 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-DOAP06340 RNU6-152P-201ENST00000384037 107 ntBASIC6.63□□□□□ -1.35
HLA-DOAP06340 RNU6-171P-201ENST00000384354 107 ntBASIC6.63□□□□□ -1.35
HLA-DOAP06340 MIR105-2-201ENST00000385083 81 ntBASIC6.63□□□□□ -1.35
HLA-DOAP06340 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 AC016769.2-201ENST00000414815 475 ntBASIC6.63□□□□□ -1.35
HLA-DOAP06340 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 AC073508.1-201ENST00000428866 656 ntBASIC6.63□□□□□ -1.35
HLA-DOAP06340 AC023141.6-201ENST00000429418 337 ntBASIC6.63□□□□□ -1.35
HLA-DOAP06340 AL606490.8-201ENST00000441624 319 ntBASIC6.63□□□□□ -1.35
HLA-DOAP06340 UBA52P7-201ENST00000486088 380 ntBASIC6.63□□□□□ -1.35
HLA-DOAP06340 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-DOAP06340 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 MTND2P38-201ENST00000522536 667 ntBASIC6.63□□□□□ -1.35
HLA-DOAP06340 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.63□□□□□ -1.35
HLA-DOAP06340 MIR4443-201ENST00000585052 53 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms