Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
LDLRP01130 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.53□□□□□ -1.52
LDLRP01130 AL390726.5-202ENST00000564800 256 ntBASIC5.53□□□□□ -1.52
LDLRP01130 AC010547.6-201ENST00000571789 193 ntBASIC5.53□□□□□ -1.52
LDLRP01130 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.53□□□□□ -1.52
LDLRP01130 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.53□□□□□ -1.52
LDLRP01130 FAM60CP-201ENST00000591086 664 ntBASIC5.53□□□□□ -1.52
LDLRP01130 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.53□□□□□ -1.52
LDLRP01130 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.53□□□□□ -1.52
LDLRP01130 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.53□□□□□ -1.52
LDLRP01130 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.53□□□□□ -1.52
LDLRP01130 AC104307.1-201ENST00000616142 196 ntBASIC5.53□□□□□ -1.52
LDLRP01130 AL590410.1-201ENST00000617925 333 ntBASIC5.53□□□□□ -1.52
LDLRP01130 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.53□□□□□ -1.52
LDLRP01130 AL136228.1-201ENST00000622221 319 ntBASIC5.53□□□□□ -1.52
LDLRP01130 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.53□□□□□ -1.52
LDLRP01130 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
LDLRP01130 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
LDLRP01130 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
LDLRP01130 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LDLRP01130 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LDLRP01130 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
LDLRP01130 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LDLRP01130 RBMY1HP-201ENST00000382759 1389 ntBASIC5.53□□□□□ -1.52
LDLRP01130 AC005261.6-201ENST00000623072 1387 ntBASIC5.53□□□□□ -1.52
LDLRP01130 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.53□□□□□ -1.52
LDLRP01130 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LDLRP01130 PSG10P-201ENST00000501199 1500 ntBASIC5.53□□□□□ -1.52
LDLRP01130 AC011503.2-201ENST00000594230 1500 ntBASIC5.53□□□□□ -1.52
LDLRP01130 AP000473.2-201ENST00000602659 1537 ntBASIC5.53□□□□□ -1.52
LDLRP01130 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LDLRP01130 AC004158.1-201ENST00000564508 4319 ntBASIC5.52□□□□□ -1.53
LDLRP01130 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.52□□□□□ -1.53
LDLRP01130 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.52□□□□□ -1.53
LDLRP01130 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.52□□□□□ -1.53
LDLRP01130 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.52□□□□□ -1.53
LDLRP01130 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LDLRP01130 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LDLRP01130 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LDLRP01130 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
LDLRP01130 RNU1-19P-201ENST00000363306 165 ntBASIC5.52□□□□□ -1.53
LDLRP01130 RNU6-1331P-201ENST00000363658 106 ntBASIC5.52□□□□□ -1.53
LDLRP01130 RNA5SP187-201ENST00000384400 119 ntBASIC5.52□□□□□ -1.53
LDLRP01130 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.52□□□□□ -1.53
LDLRP01130 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LDLRP01130 AL132875.1-201ENST00000403623 949 ntBASIC5.52□□□□□ -1.53
LDLRP01130 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.52□□□□□ -1.53
LDLRP01130 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.52□□□□□ -1.53
LDLRP01130 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.52□□□□□ -1.53
LDLRP01130 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LDLRP01130 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.52□□□□□ -1.53
LDLRP01130 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.52□□□□□ -1.53
LDLRP01130 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.52□□□□□ -1.53
LDLRP01130 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.52□□□□□ -1.53
LDLRP01130 MTCO1P57-201ENST00000432182 261 ntBASIC5.52□□□□□ -1.53
LDLRP01130 GAPDHP58-201ENST00000438477 1006 ntBASIC5.52□□□□□ -1.53
LDLRP01130 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.52□□□□□ -1.53
LDLRP01130 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.52□□□□□ -1.53
LDLRP01130 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.52□□□□□ -1.53
LDLRP01130 RPL38P3-201ENST00000484463 213 ntBASIC5.52□□□□□ -1.53
LDLRP01130 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LDLRP01130 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.52□□□□□ -1.53
LDLRP01130 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.52□□□□□ -1.53
LDLRP01130 GAPDHP62-201ENST00000515313 990 ntBASIC5.52□□□□□ -1.53
LDLRP01130 MIR2117-201ENST00000516780 80 ntBASIC5.52□□□□□ -1.53
LDLRP01130 AC104997.1-201ENST00000519761 717 ntBASIC5.52□□□□□ -1.53
LDLRP01130 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.52□□□□□ -1.53
LDLRP01130 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.52□□□□□ -1.53
LDLRP01130 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LDLRP01130 AL731537.2-201ENST00000561565 951 ntBASIC5.52□□□□□ -1.53
LDLRP01130 AC019322.1-201ENST00000571869 389 ntBASIC5.52□□□□□ -1.53
LDLRP01130 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.52□□□□□ -1.53
LDLRP01130 AC005244.1-201ENST00000582566 339 ntBASIC5.52□□□□□ -1.53
LDLRP01130 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.52□□□□□ -1.53
LDLRP01130 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.52□□□□□ -1.53
LDLRP01130 AC005014.3-201ENST00000605985 190 ntBASIC5.52□□□□□ -1.53
LDLRP01130 MIR6809-201ENST00000612189 116 ntBASIC5.52□□□□□ -1.53
LDLRP01130 MIR6133-201ENST00000617057 108 ntBASIC5.52□□□□□ -1.53
LDLRP01130 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LDLRP01130 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.52□□□□□ -1.53
LDLRP01130 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.52□□□□□ -1.53
LDLRP01130 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
LDLRP01130 AC125336.1-201ENST00000508893 2827 ntBASIC5.52□□□□□ -1.53
LDLRP01130 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LDLRP01130 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LDLRP01130 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.52□□□□□ -1.53
LDLRP01130 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LDLRP01130 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
LDLRP01130 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LDLRP01130 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.52□□□□□ -1.53
LDLRP01130 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
LDLRP01130 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
LDLRP01130 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LDLRP01130 AC007342.5-201ENST00000571340 2142 ntBASIC5.51□□□□□ -1.53
LDLRP01130 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.51□□□□□ -1.53
LDLRP01130 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LDLRP01130 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
LDLRP01130 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.51□□□□□ -1.53
LDLRP01130 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
LDLRP01130 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms