Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TIMP1P01033 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.83□□□□□ -1.48
TIMP1P01033 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TIMP1P01033 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC5.83□□□□□ -1.48
TIMP1P01033 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.83□□□□□ -1.48
TIMP1P01033 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TIMP1P01033 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
TIMP1P01033 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TIMP1P01033 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TIMP1P01033 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TIMP1P01033 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TIMP1P01033 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.83□□□□□ -1.48
TIMP1P01033 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TIMP1P01033 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TIMP1P01033 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TIMP1P01033 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TIMP1P01033 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TIMP1P01033 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.82□□□□□ -1.48
TIMP1P01033 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TIMP1P01033 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
TIMP1P01033 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TIMP1P01033 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TIMP1P01033 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TIMP1P01033 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
TIMP1P01033 RN7SKP113-201ENST00000363891 295 ntBASIC5.82□□□□□ -1.48
TIMP1P01033 RNU1-136P-201ENST00000384181 164 ntBASIC5.82□□□□□ -1.48
TIMP1P01033 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TIMP1P01033 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TIMP1P01033 CHEK2P3-201ENST00000416118 248 ntBASIC5.82□□□□□ -1.48
TIMP1P01033 DDX39BP1-205ENST00000422507 192 ntBASIC5.82□□□□□ -1.48
TIMP1P01033 HSPD1P12-201ENST00000429127 1069 ntBASIC5.82□□□□□ -1.48
TIMP1P01033 RPL7P56-201ENST00000429441 717 ntBASIC5.82□□□□□ -1.48
TIMP1P01033 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.82□□□□□ -1.48
TIMP1P01033 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.82□□□□□ -1.48
TIMP1P01033 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.82□□□□□ -1.48
TIMP1P01033 C1GALT1P3-201ENST00000522049 819 ntBASIC5.82□□□□□ -1.48
TIMP1P01033 OR5AM1P-201ENST00000532136 1032 ntBASIC5.82□□□□□ -1.48
TIMP1P01033 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TIMP1P01033 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.82□□□□□ -1.48
TIMP1P01033 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.82□□□□□ -1.48
TIMP1P01033 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.82□□□□□ -1.48
TIMP1P01033 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TIMP1P01033 AP001885.1-201ENST00000621658 558 ntBASIC5.82□□□□□ -1.48
TIMP1P01033 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.82□□□□□ -1.48
TIMP1P01033 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.82□□□□□ -1.48
TIMP1P01033 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.82□□□□□ -1.48
TIMP1P01033 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TIMP1P01033 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
TIMP1P01033 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
TIMP1P01033 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.82□□□□□ -1.48
TIMP1P01033 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
TIMP1P01033 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TIMP1P01033 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TIMP1P01033 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.81□□□□□ -1.48
TIMP1P01033 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
TIMP1P01033 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TIMP1P01033 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TIMP1P01033 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
TIMP1P01033 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TIMP1P01033 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TIMP1P01033 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TIMP1P01033 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
TIMP1P01033 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TIMP1P01033 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.81□□□□□ -1.48
TIMP1P01033 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
TIMP1P01033 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
TIMP1P01033 AC019050.1-201ENST00000418508 492 ntBASIC5.81□□□□□ -1.48
TIMP1P01033 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.81□□□□□ -1.48
TIMP1P01033 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.81□□□□□ -1.48
TIMP1P01033 NDUFA5P8-201ENST00000449019 346 ntBASIC5.81□□□□□ -1.48
TIMP1P01033 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.81□□□□□ -1.48
TIMP1P01033 RN7SL423P-201ENST00000486202 304 ntBASIC5.81□□□□□ -1.48
TIMP1P01033 HMGN2P25-201ENST00000486956 268 ntBASIC5.81□□□□□ -1.48
TIMP1P01033 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TIMP1P01033 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.81□□□□□ -1.48
TIMP1P01033 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.81□□□□□ -1.48
TIMP1P01033 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
TIMP1P01033 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TIMP1P01033 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
TIMP1P01033 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.81□□□□□ -1.48
TIMP1P01033 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
TIMP1P01033 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TIMP1P01033 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
TIMP1P01033 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.81□□□□□ -1.48
TIMP1P01033 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TIMP1P01033 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.81□□□□□ -1.48
TIMP1P01033 MIR4691-201ENST00000583764 85 ntBASIC5.81□□□□□ -1.48
TIMP1P01033 AC068790.4-201ENST00000602474 263 ntBASIC5.81□□□□□ -1.48
TIMP1P01033 AC005252.1-201ENST00000604518 1063 ntBASIC5.81□□□□□ -1.48
TIMP1P01033 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.81□□□□□ -1.48
TIMP1P01033 MIR7703-201ENST00000620784 77 ntBASIC5.81□□□□□ -1.48
TIMP1P01033 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.81□□□□□ -1.48
TIMP1P01033 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TIMP1P01033 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TIMP1P01033 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TIMP1P01033 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TIMP1P01033 NXF4-202ENST00000416098 1465 ntBASIC5.81□□□□□ -1.48
TIMP1P01033 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.81□□□□□ -1.48
TIMP1P01033 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TIMP1P01033 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms