Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CNOT4O95628 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CNOT4O95628 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
CNOT4O95628 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
CNOT4O95628 RPL12P13-201ENST00000310055 497 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CNOT4O95628 ANKRD36P1-201ENST00000344424 659 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CNOT4O95628 UBE2Q2P1-202ENST00000354771 883 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.02□□□□□ -1.45
CNOT4O95628 OR5H15-201ENST00000383696 930 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 ELOCP17-201ENST00000414751 326 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 RPSAP60-201ENST00000415403 880 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 SPATA20P1-201ENST00000423089 438 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
CNOT4O95628 AC000089.1-201ENST00000424559 801 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 HSPE1P16-201ENST00000426640 348 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.02□□□□□ -1.45
CNOT4O95628 GAPDHP19-201ENST00000431768 1005 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC6.02□□□□□ -1.45
CNOT4O95628 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.02□□□□□ -1.45
CNOT4O95628 CACYBPP1-201ENST00000438592 684 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC6.02□□□□□ -1.45
CNOT4O95628 E2F6P3-201ENST00000441743 743 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 SNRPBP1-201ENST00000443634 282 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.02□□□□□ -1.45
CNOT4O95628 AC097262.1-201ENST00000452559 548 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 MEF2AP1-201ENST00000454867 863 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 AC083806.1-201ENST00000468934 316 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 UOX-201ENST00000471089 899 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 RN7SL216P-201ENST00000471607 298 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 NAA50-206ENST00000493454 964 ntTSL 2 BASIC6.02□□□□□ -1.45
CNOT4O95628 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CNOT4O95628 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.02□□□□□ -1.45
CNOT4O95628 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.02□□□□□ -1.45
CNOT4O95628 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC6.02□□□□□ -1.45
CNOT4O95628 SNORA81.2-201ENST00000516868 170 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CNOT4O95628 PDCL2P2-201ENST00000533651 189 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CNOT4O95628 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.02□□□□□ -1.45
CNOT4O95628 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.02□□□□□ -1.45
CNOT4O95628 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CNOT4O95628 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.02□□□□□ -1.45
CNOT4O95628 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.02□□□□□ -1.45
CNOT4O95628 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC6.02□□□□□ -1.45
CNOT4O95628 AC090888.3-201ENST00000558917 509 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.02□□□□□ -1.45
CNOT4O95628 MIR4271-201ENST00000582451 67 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.02□□□□□ -1.45
CNOT4O95628 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.02□□□□□ -1.45
CNOT4O95628 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.02□□□□□ -1.45
CNOT4O95628 AL590032.1-201ENST00000604920 252 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.02□□□□□ -1.45
CNOT4O95628 AC068944.2-201ENST00000610373 403 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC6.02□□□□□ -1.45
CNOT4O95628 U6.42-201ENST00000618440 107 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 AC145207.9-201ENST00000623802 325 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 AC092656.1-203ENST00000624134 423 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 AC005609.4-201ENST00000625071 447 ntBASIC6.02□□□□□ -1.45
CNOT4O95628 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.02□□□□□ -1.45
CNOT4O95628 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.02□□□□□ -1.45
CNOT4O95628 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CNOT4O95628 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CNOT4O95628 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CNOT4O95628 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.02□□□□□ -1.45
CNOT4O95628 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CNOT4O95628 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CNOT4O95628 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.02□□□□□ -1.45
CNOT4O95628 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.02□□□□□ -1.45
CNOT4O95628 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CNOT4O95628 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CNOT4O95628 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.02□□□□□ -1.45
CNOT4O95628 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.02□□□□□ -1.45
CNOT4O95628 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.02□□□□□ -1.45
CNOT4O95628 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CNOT4O95628 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CNOT4O95628 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.01□□□□□ -1.45
CNOT4O95628 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CNOT4O95628 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CNOT4O95628 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CNOT4O95628 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.01□□□□□ -1.45
CNOT4O95628 AL359715.4-201ENST00000606629 1436 ntBASIC6.01□□□□□ -1.45
CNOT4O95628 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CNOT4O95628 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CNOT4O95628 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
CNOT4O95628 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CNOT4O95628 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.01□□□□□ -1.45
CNOT4O95628 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CNOT4O95628 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
CNOT4O95628 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CNOT4O95628 RN7SKP250-201ENST00000363924 321 ntBASIC6.01□□□□□ -1.45
CNOT4O95628 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CNOT4O95628 AL353133.1-201ENST00000407695 401 ntBASIC6.01□□□□□ -1.45
CNOT4O95628 MOB4-205ENST00000409916 829 ntTSL 3 BASIC6.01□□□□□ -1.45
CNOT4O95628 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.01□□□□□ -1.45
CNOT4O95628 AC092638.1-201ENST00000411966 1275 ntBASIC6.01□□□□□ -1.45
CNOT4O95628 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.01□□□□□ -1.45
CNOT4O95628 RPL7AP51-201ENST00000422016 760 ntBASIC6.01□□□□□ -1.45
CNOT4O95628 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms