Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
OPHN1O60890 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.44□□□□□ -1.38
OPHN1O60890 AC116667.2-201ENST00000641075 823 ntBASIC6.44□□□□□ -1.38
OPHN1O60890 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
OPHN1O60890 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
OPHN1O60890 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
OPHN1O60890 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
OPHN1O60890 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
OPHN1O60890 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
OPHN1O60890 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
OPHN1O60890 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.44□□□□□ -1.38
OPHN1O60890 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.44□□□□□ -1.38
OPHN1O60890 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
OPHN1O60890 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
OPHN1O60890 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.43□□□□□ -1.38
OPHN1O60890 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.43□□□□□ -1.38
OPHN1O60890 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
OPHN1O60890 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.43□□□□□ -1.38
OPHN1O60890 RN7SKP81-201ENST00000365603 331 ntBASIC6.43□□□□□ -1.38
OPHN1O60890 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
OPHN1O60890 ATP5F1P2-201ENST00000398143 760 ntBASIC6.43□□□□□ -1.38
OPHN1O60890 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
OPHN1O60890 AL512422.1-201ENST00000407033 553 ntBASIC6.43□□□□□ -1.38
OPHN1O60890 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.43□□□□□ -1.38
OPHN1O60890 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.43□□□□□ -1.38
OPHN1O60890 PTCD2P2-201ENST00000415579 1095 ntBASIC6.43□□□□□ -1.38
OPHN1O60890 AC008173.1-201ENST00000418901 264 ntBASIC6.43□□□□□ -1.38
OPHN1O60890 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.43□□□□□ -1.38
OPHN1O60890 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
OPHN1O60890 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
OPHN1O60890 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.43□□□□□ -1.38
OPHN1O60890 MORF4-201ENST00000447135 971 ntBASIC6.43□□□□□ -1.38
OPHN1O60890 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.43□□□□□ -1.38
OPHN1O60890 VN1R40P-201ENST00000455196 941 ntBASIC6.43□□□□□ -1.38
OPHN1O60890 RPL7L1P3-201ENST00000455249 689 ntBASIC6.43□□□□□ -1.38
OPHN1O60890 AC074386.1-201ENST00000476560 767 ntBASIC6.43□□□□□ -1.38
OPHN1O60890 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
OPHN1O60890 LSM3P4-201ENST00000502948 309 ntBASIC6.43□□□□□ -1.38
OPHN1O60890 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC6.43□□□□□ -1.38
OPHN1O60890 GAPDHP71-201ENST00000511530 1003 ntBASIC6.43□□□□□ -1.38
OPHN1O60890 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.43□□□□□ -1.38
OPHN1O60890 MTATP6P1-201ENST00000514057 681 ntBASIC6.43□□□□□ -1.38
OPHN1O60890 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC6.43□□□□□ -1.38
OPHN1O60890 OR7E128P-201ENST00000532736 1024 ntBASIC6.43□□□□□ -1.38
OPHN1O60890 EMP1-206ENST00000537612 505 ntTSL 3 BASIC6.43□□□□□ -1.38
OPHN1O60890 AC008055.1-201ENST00000547032 609 ntBASIC6.43□□□□□ -1.38
OPHN1O60890 HNRNPCP1-201ENST00000556181 766 ntBASIC6.43□□□□□ -1.38
OPHN1O60890 AC021483.2-201ENST00000567415 758 ntBASIC6.43□□□□□ -1.38
OPHN1O60890 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.43□□□□□ -1.38
OPHN1O60890 AC008507.3-201ENST00000585753 472 ntBASIC6.43□□□□□ -1.38
OPHN1O60890 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC6.43□□□□□ -1.38
OPHN1O60890 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC6.43□□□□□ -1.38
OPHN1O60890 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.43□□□□□ -1.38
OPHN1O60890 AC091304.6-201ENST00000619761 202 ntBASIC6.43□□□□□ -1.38
OPHN1O60890 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
OPHN1O60890 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.43□□□□□ -1.38
OPHN1O60890 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
OPHN1O60890 MTCO1P11-201ENST00000429111 1528 ntBASIC6.43□□□□□ -1.38
OPHN1O60890 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.43□□□□□ -1.38
OPHN1O60890 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
OPHN1O60890 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
OPHN1O60890 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
OPHN1O60890 AL132656.3-201ENST00000606384 1595 ntBASIC6.43□□□□□ -1.38
OPHN1O60890 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
OPHN1O60890 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
OPHN1O60890 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.43□□□□□ -1.38
OPHN1O60890 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.43□□□□□ -1.38
OPHN1O60890 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.43□□□□□ -1.38
OPHN1O60890 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
OPHN1O60890 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
OPHN1O60890 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.42□□□□□ -1.38
OPHN1O60890 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
OPHN1O60890 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
OPHN1O60890 AL356317.1-201ENST00000396110 1436 ntBASIC6.42□□□□□ -1.38
OPHN1O60890 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
OPHN1O60890 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
OPHN1O60890 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
OPHN1O60890 ZNF101P1-201ENST00000435701 1720 ntBASIC6.42□□□□□ -1.38
OPHN1O60890 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
OPHN1O60890 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
OPHN1O60890 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
OPHN1O60890 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
OPHN1O60890 SNORA17A-201ENST00000391185 133 ntBASIC6.42□□□□□ -1.38
OPHN1O60890 AL445238.1-204ENST00000400311 463 ntBASIC6.42□□□□□ -1.38
OPHN1O60890 RPL10P10-201ENST00000403509 664 ntBASIC6.42□□□□□ -1.38
OPHN1O60890 RN7SKP97-201ENST00000410966 333 ntBASIC6.42□□□□□ -1.38
OPHN1O60890 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.42□□□□□ -1.38
OPHN1O60890 Z68694.1-201ENST00000413929 841 ntBASIC6.42□□□□□ -1.38
OPHN1O60890 KRR1P1-201ENST00000419430 803 ntBASIC6.42□□□□□ -1.38
OPHN1O60890 AC007562.1-201ENST00000421819 517 ntBASIC6.42□□□□□ -1.38
OPHN1O60890 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.42□□□□□ -1.38
OPHN1O60890 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.42□□□□□ -1.38
OPHN1O60890 EMC3-AS1-205ENST00000438698 534 ntBASIC6.42□□□□□ -1.38
OPHN1O60890 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.42□□□□□ -1.38
OPHN1O60890 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.42□□□□□ -1.38
OPHN1O60890 CXCR2P1-202ENST00000443392 1074 ntBASIC6.42□□□□□ -1.38
OPHN1O60890 AC023274.2-201ENST00000445264 521 ntBASIC6.42□□□□□ -1.38
OPHN1O60890 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.42□□□□□ -1.38
OPHN1O60890 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
OPHN1O60890 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms