Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HCN1O60741 AL603750.1-201ENST00000624216 1717 ntBASIC5.2□□□□□ -1.58
HCN1O60741 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HCN1O60741 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.2□□□□□ -1.58
HCN1O60741 AL138820.1-201ENST00000617901 5305 ntBASIC5.2□□□□□ -1.58
HCN1O60741 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HCN1O60741 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HCN1O60741 AC002524.1-201ENST00000411687 547 ntBASIC5.2□□□□□ -1.58
HCN1O60741 AL357752.1-201ENST00000412817 349 ntBASIC5.2□□□□□ -1.58
HCN1O60741 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.2□□□□□ -1.58
HCN1O60741 ARAFP2-201ENST00000440565 559 ntBASIC5.2□□□□□ -1.58
HCN1O60741 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.2□□□□□ -1.58
HCN1O60741 AL450996.1-201ENST00000445574 1202 ntBASIC5.2□□□□□ -1.58
HCN1O60741 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.2□□□□□ -1.58
HCN1O60741 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.2□□□□□ -1.58
HCN1O60741 AC087672.1-201ENST00000479876 766 ntBASIC5.2□□□□□ -1.58
HCN1O60741 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.2□□□□□ -1.58
HCN1O60741 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.2□□□□□ -1.58
HCN1O60741 RN7SKP5-201ENST00000517045 272 ntBASIC5.2□□□□□ -1.58
HCN1O60741 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.2□□□□□ -1.58
HCN1O60741 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.2□□□□□ -1.58
HCN1O60741 NRBF2P4-201ENST00000520874 850 ntBASIC5.2□□□□□ -1.58
HCN1O60741 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.2□□□□□ -1.58
HCN1O60741 IGLV3-30-201ENST00000524362 298 ntBASIC5.2□□□□□ -1.58
HCN1O60741 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.2□□□□□ -1.58
HCN1O60741 AC137627.1-201ENST00000545761 289 ntBASIC5.2□□□□□ -1.58
HCN1O60741 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.2□□□□□ -1.58
HCN1O60741 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.2□□□□□ -1.58
HCN1O60741 MIR3176-201ENST00000582210 90 ntBASIC5.2□□□□□ -1.58
HCN1O60741 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HCN1O60741 AC022467.1-201ENST00000614738 749 ntBASIC5.2□□□□□ -1.58
HCN1O60741 AC090607.5-201ENST00000615692 224 ntBASIC5.2□□□□□ -1.58
HCN1O60741 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.2□□□□□ -1.58
HCN1O60741 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.2□□□□□ -1.58
HCN1O60741 AC138627.1-204ENST00000641894 765 ntBASIC5.2□□□□□ -1.58
HCN1O60741 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HCN1O60741 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HCN1O60741 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HCN1O60741 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HCN1O60741 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HCN1O60741 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.19□□□□□ -1.58
HCN1O60741 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HCN1O60741 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.19□□□□□ -1.58
HCN1O60741 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.19□□□□□ -1.58
HCN1O60741 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HCN1O60741 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HCN1O60741 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HCN1O60741 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HCN1O60741 AL159987.1-201ENST00000347911 293 ntBASIC5.19□□□□□ -1.58
HCN1O60741 RNA5SP132-201ENST00000364725 118 ntBASIC5.19□□□□□ -1.58
HCN1O60741 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.19□□□□□ -1.58
HCN1O60741 AC005522.1-201ENST00000395416 346 ntBASIC5.19□□□□□ -1.58
HCN1O60741 AL391422.1-201ENST00000402155 436 ntBASIC5.19□□□□□ -1.58
HCN1O60741 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.19□□□□□ -1.58
HCN1O60741 AL596448.1-201ENST00000415024 392 ntBASIC5.19□□□□□ -1.58
HCN1O60741 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.19□□□□□ -1.58
HCN1O60741 RNF10P1-201ENST00000418589 369 ntBASIC5.19□□□□□ -1.58
HCN1O60741 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.19□□□□□ -1.58
HCN1O60741 TNPO1P1-201ENST00000423641 1138 ntBASIC5.19□□□□□ -1.58
HCN1O60741 AL121578.1-201ENST00000428051 892 ntBASIC5.19□□□□□ -1.58
HCN1O60741 TMEM183AP1-205ENST00000432739 290 ntBASIC5.19□□□□□ -1.58
HCN1O60741 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.19□□□□□ -1.58
HCN1O60741 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.19□□□□□ -1.58
HCN1O60741 EEF1B2P6-201ENST00000445713 673 ntBASIC5.19□□□□□ -1.58
HCN1O60741 RN7SL214P-201ENST00000487317 265 ntBASIC5.19□□□□□ -1.58
HCN1O60741 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.19□□□□□ -1.58
HCN1O60741 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
HCN1O60741 ATP5LP3-201ENST00000514223 304 ntBASIC5.19□□□□□ -1.58
HCN1O60741 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.19□□□□□ -1.58
HCN1O60741 MRPS16P1-201ENST00000523462 412 ntBASIC5.19□□□□□ -1.58
HCN1O60741 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.19□□□□□ -1.58
HCN1O60741 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
HCN1O60741 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.19□□□□□ -1.58
HCN1O60741 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.19□□□□□ -1.58
HCN1O60741 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.19□□□□□ -1.58
HCN1O60741 AC063977.5-201ENST00000601044 974 ntBASIC5.19□□□□□ -1.58
HCN1O60741 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.19□□□□□ -1.58
HCN1O60741 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.19□□□□□ -1.58
HCN1O60741 AL354950.1-201ENST00000614150 568 ntBASIC5.19□□□□□ -1.58
HCN1O60741 AC008115.3-201ENST00000614874 549 ntBASIC5.19□□□□□ -1.58
HCN1O60741 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.19□□□□□ -1.58
HCN1O60741 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HCN1O60741 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HCN1O60741 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
HCN1O60741 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HCN1O60741 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.19□□□□□ -1.58
HCN1O60741 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HCN1O60741 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.19□□□□□ -1.58
HCN1O60741 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HCN1O60741 MTCO1P15-201ENST00000529569 1526 ntBASIC5.18□□□□□ -1.58
HCN1O60741 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HCN1O60741 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.18□□□□□ -1.58
HCN1O60741 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HCN1O60741 AC092681.1-201ENST00000297369 291 ntBASIC5.18□□□□□ -1.58
HCN1O60741 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HCN1O60741 MIR130A-201ENST00000385274 89 ntBASIC5.18□□□□□ -1.58
HCN1O60741 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HCN1O60741 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.18□□□□□ -1.58
HCN1O60741 GAPDHP42-201ENST00000406848 981 ntBASIC5.18□□□□□ -1.58
HCN1O60741 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms