Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.72□□□□□ -1.49
SMAD6O43541 MTND5P21-201ENST00000531961 522 ntBASIC5.72□□□□□ -1.49
SMAD6O43541 NPM1P42-201ENST00000560329 862 ntBASIC5.72□□□□□ -1.49
SMAD6O43541 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.72□□□□□ -1.49
SMAD6O43541 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.72□□□□□ -1.49
SMAD6O43541 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.72□□□□□ -1.49
SMAD6O43541 AL451049.1-201ENST00000608672 497 ntBASIC5.72□□□□□ -1.49
SMAD6O43541 AL512506.1-201ENST00000613918 449 ntBASIC5.72□□□□□ -1.49
SMAD6O43541 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.72□□□□□ -1.49
SMAD6O43541 AC015660.5-201ENST00000623238 564 ntBASIC5.72□□□□□ -1.49
SMAD6O43541 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.72□□□□□ -1.49
SMAD6O43541 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.72□□□□□ -1.49
SMAD6O43541 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.72□□□□□ -1.49
SMAD6O43541 AP001153.1-201ENST00000641024 338 ntBASIC5.72□□□□□ -1.49
SMAD6O43541 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SMAD6O43541 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMAD6O43541 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMAD6O43541 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMAD6O43541 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMAD6O43541 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMAD6O43541 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMAD6O43541 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMAD6O43541 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMAD6O43541 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMAD6O43541 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMAD6O43541 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SMAD6O43541 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.49
SMAD6O43541 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.49
SMAD6O43541 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SMAD6O43541 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
SMAD6O43541 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
SMAD6O43541 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.71□□□□□ -1.49
SMAD6O43541 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.71□□□□□ -1.5
SMAD6O43541 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SMAD6O43541 AL592494.2-201ENST00000425455 1548 ntBASIC5.71□□□□□ -1.5
SMAD6O43541 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SMAD6O43541 RNA5SP132-201ENST00000364725 118 ntBASIC5.71□□□□□ -1.5
SMAD6O43541 ATP5F1P6-201ENST00000402768 767 ntBASIC5.71□□□□□ -1.5
SMAD6O43541 AC096921.1-201ENST00000411661 375 ntBASIC5.71□□□□□ -1.5
SMAD6O43541 MTCO2P17-201ENST00000424336 677 ntBASIC5.71□□□□□ -1.5
SMAD6O43541 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.71□□□□□ -1.5
SMAD6O43541 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SMAD6O43541 VDAC2P4-201ENST00000452925 711 ntBASIC5.71□□□□□ -1.5
SMAD6O43541 OFD1P3Y-201ENST00000453312 783 ntBASIC5.71□□□□□ -1.5
SMAD6O43541 RPS3AP53-201ENST00000454716 778 ntBASIC5.71□□□□□ -1.5
SMAD6O43541 RANP1-206ENST00000455094 651 ntBASIC5.71□□□□□ -1.5
SMAD6O43541 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.71□□□□□ -1.5
SMAD6O43541 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.71□□□□□ -1.5
SMAD6O43541 AC093719.1-201ENST00000480427 441 ntBASIC5.71□□□□□ -1.5
SMAD6O43541 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.71□□□□□ -1.5
SMAD6O43541 SCARNA1-201ENST00000517138 166 ntBASIC5.71□□□□□ -1.5
SMAD6O43541 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.71□□□□□ -1.5
SMAD6O43541 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.71□□□□□ -1.5
SMAD6O43541 RBM22P12-201ENST00000567098 1255 ntBASIC5.71□□□□□ -1.5
SMAD6O43541 AC009303.3-201ENST00000591103 736 ntBASIC5.71□□□□□ -1.5
SMAD6O43541 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.71□□□□□ -1.5
SMAD6O43541 BNIP3P19-201ENST00000605397 577 ntBASIC5.71□□□□□ -1.5
SMAD6O43541 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.71□□□□□ -1.5
SMAD6O43541 AC027449.1-201ENST00000608890 407 ntBASIC5.71□□□□□ -1.5
SMAD6O43541 AC109309.2-201ENST00000612597 332 ntBASIC5.71□□□□□ -1.5
SMAD6O43541 AC022467.1-201ENST00000614738 749 ntBASIC5.71□□□□□ -1.5
SMAD6O43541 AC004808.2-201ENST00000627965 773 ntBASIC5.71□□□□□ -1.5
SMAD6O43541 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.71□□□□□ -1.5
SMAD6O43541 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SMAD6O43541 AC068870.1-201ENST00000563737 2455 ntBASIC5.71□□□□□ -1.5
SMAD6O43541 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.71□□□□□ -1.5
SMAD6O43541 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SMAD6O43541 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
SMAD6O43541 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SMAD6O43541 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.7□□□□□ -1.5
SMAD6O43541 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SMAD6O43541 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
SMAD6O43541 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SMAD6O43541 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SMAD6O43541 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SMAD6O43541 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SMAD6O43541 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.7□□□□□ -1.5
SMAD6O43541 RNA5SP326-201ENST00000363209 110 ntBASIC5.7□□□□□ -1.5
SMAD6O43541 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SMAD6O43541 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SMAD6O43541 NPM1P37-201ENST00000403105 874 ntBASIC5.7□□□□□ -1.5
SMAD6O43541 GAPDHP42-201ENST00000406848 981 ntBASIC5.7□□□□□ -1.5
SMAD6O43541 OR3A2-201ENST00000408891 1076 ntBASIC5.7□□□□□ -1.5
SMAD6O43541 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.7□□□□□ -1.5
SMAD6O43541 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.7□□□□□ -1.5
SMAD6O43541 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.7□□□□□ -1.5
SMAD6O43541 MTND2P2-201ENST00000434633 945 ntBASIC5.7□□□□□ -1.5
SMAD6O43541 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.7□□□□□ -1.5
SMAD6O43541 RNF2P1-201ENST00000442955 1010 ntBASIC5.7□□□□□ -1.5
SMAD6O43541 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.7□□□□□ -1.5
SMAD6O43541 RPL35AP19-201ENST00000469425 329 ntBASIC5.7□□□□□ -1.5
SMAD6O43541 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SMAD6O43541 RN7SL184P-201ENST00000488308 297 ntBASIC5.7□□□□□ -1.5
SMAD6O43541 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.7□□□□□ -1.5
SMAD6O43541 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.7□□□□□ -1.5
SMAD6O43541 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.7□□□□□ -1.5
SMAD6O43541 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.7□□□□□ -1.5
SMAD6O43541 AC093815.1-201ENST00000508637 280 ntBASIC5.7□□□□□ -1.5
SMAD6O43541 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.7□□□□□ -1.5
SMAD6O43541 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms