Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
O00370 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
O00370 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
O00370 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.87□□□□□ -1.47
O00370 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
O00370 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.87□□□□□ -1.47
O00370 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
O00370 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
O00370 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
O00370 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
O00370 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
O00370 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.86□□□□□ -1.47
O00370 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
O00370 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
O00370 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
O00370 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
O00370 RN7SKP6-201ENST00000364795 319 ntBASIC5.86□□□□□ -1.47
O00370 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
O00370 MIR551A-201ENST00000385042 96 ntBASIC5.86□□□□□ -1.47
O00370 MIR323B-201ENST00000385269 82 ntBASIC5.86□□□□□ -1.47
O00370 AL391422.1-201ENST00000402155 436 ntBASIC5.86□□□□□ -1.47
O00370 GABARAPL3-201ENST00000412799 354 ntBASIC5.86□□□□□ -1.47
O00370 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
O00370 RFESDP1-201ENST00000422350 461 ntBASIC5.86□□□□□ -1.47
O00370 AL390119.1-201ENST00000440329 312 ntBASIC5.86□□□□□ -1.47
O00370 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.86□□□□□ -1.47
O00370 AC023141.9-201ENST00000458734 412 ntBASIC5.86□□□□□ -1.47
O00370 RN7SL717P-201ENST00000478343 297 ntBASIC5.86□□□□□ -1.47
O00370 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.86□□□□□ -1.47
O00370 AC008676.3-201ENST00000521237 435 ntBASIC5.86□□□□□ -1.47
O00370 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.86□□□□□ -1.47
O00370 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.86□□□□□ -1.47
O00370 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
O00370 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.86□□□□□ -1.47
O00370 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.86□□□□□ -1.47
O00370 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.86□□□□□ -1.47
O00370 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.86□□□□□ -1.47
O00370 AC008833.1-201ENST00000611633 691 ntBASIC5.86□□□□□ -1.47
O00370 NF1P10-201ENST00000613227 742 ntBASIC5.86□□□□□ -1.47
O00370 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.86□□□□□ -1.47
O00370 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.86□□□□□ -1.47
O00370 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
O00370 AC010266.2-201ENST00000564741 3255 ntBASIC5.86□□□□□ -1.47
O00370 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.86□□□□□ -1.47
O00370 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
O00370 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
O00370 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
O00370 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
O00370 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
O00370 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.85□□□□□ -1.47
O00370 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
O00370 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
O00370 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
O00370 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
O00370 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
O00370 RNA5SP242-201ENST00000364171 118 ntBASIC5.85□□□□□ -1.47
O00370 RNU4-2-201ENST00000365668 141 ntBASIC5.85□□□□□ -1.47
O00370 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.85□□□□□ -1.47
O00370 RPS20P25-201ENST00000412447 352 ntBASIC5.85□□□□□ -1.47
O00370 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.85□□□□□ -1.47
O00370 AC009784.1-201ENST00000426484 460 ntBASIC5.85□□□□□ -1.47
O00370 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.85□□□□□ -1.47
O00370 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.85□□□□□ -1.47
O00370 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.85□□□□□ -1.47
O00370 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.85□□□□□ -1.47
O00370 IGBP1P3-201ENST00000447449 1000 ntBASIC5.85□□□□□ -1.47
O00370 GAPDHP14-201ENST00000450472 937 ntBASIC5.85□□□□□ -1.47
O00370 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.85□□□□□ -1.47
O00370 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.85□□□□□ -1.47
O00370 RN7SL466P-201ENST00000497546 295 ntBASIC5.85□□□□□ -1.47
O00370 AC098799.1-201ENST00000504752 800 ntBASIC5.85□□□□□ -1.47
O00370 AC021106.1-201ENST00000509020 1058 ntBASIC5.85□□□□□ -1.47
O00370 ASNSP4-201ENST00000511103 447 ntBASIC5.85□□□□□ -1.47
O00370 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.85□□□□□ -1.47
O00370 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.85□□□□□ -1.47
O00370 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.85□□□□□ -1.47
O00370 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
O00370 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
O00370 SNORD95-201ENST00000579879 68 ntBASIC5.85□□□□□ -1.47
O00370 AC010487.1-201ENST00000594408 1172 ntBASIC5.85□□□□□ -1.47
O00370 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.85□□□□□ -1.47
O00370 LSM1P2-201ENST00000604911 322 ntBASIC5.85□□□□□ -1.47
O00370 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.85□□□□□ -1.47
O00370 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.85□□□□□ -1.47
O00370 AC132068.1-201ENST00000623805 459 ntBASIC5.85□□□□□ -1.47
O00370 AL691477.1-201ENST00000624398 162 ntBASIC5.85□□□□□ -1.47
O00370 AC021766.1-201ENST00000624404 741 ntBASIC5.85□□□□□ -1.47
O00370 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.85□□□□□ -1.47
O00370 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.85□□□□□ -1.47
O00370 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
O00370 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
O00370 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
O00370 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
O00370 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
O00370 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
O00370 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
O00370 NAMPTP1-201ENST00000440465 2514 ntBASIC5.85□□□□□ -1.47
O00370 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
O00370 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
O00370 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms