Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.11□□□□□ -1.43
DDX39AO00148 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
DDX39AO00148 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
DDX39AO00148 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
DDX39AO00148 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.11□□□□□ -1.43
DDX39AO00148 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.11□□□□□ -1.43
DDX39AO00148 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.11□□□□□ -1.43
DDX39AO00148 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.11□□□□□ -1.43
DDX39AO00148 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
DDX39AO00148 RNA5SP339-201ENST00000390987 122 ntBASIC6.11□□□□□ -1.43
DDX39AO00148 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
DDX39AO00148 AL445213.1-201ENST00000412589 747 ntBASIC6.11□□□□□ -1.43
DDX39AO00148 AC098592.2-201ENST00000413158 265 ntBASIC6.11□□□□□ -1.43
DDX39AO00148 RPL23AP18-201ENST00000416139 468 ntBASIC6.11□□□□□ -1.43
DDX39AO00148 AC234781.4-201ENST00000419384 244 ntBASIC6.11□□□□□ -1.43
DDX39AO00148 RPL12P43-201ENST00000420608 499 ntBASIC6.11□□□□□ -1.43
DDX39AO00148 RIMKLBP2-201ENST00000424737 654 ntBASIC6.11□□□□□ -1.43
DDX39AO00148 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.11□□□□□ -1.43
DDX39AO00148 RPS23P9-201ENST00000448848 438 ntBASIC6.11□□□□□ -1.43
DDX39AO00148 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.11□□□□□ -1.43
DDX39AO00148 RN7SL515P-201ENST00000463999 297 ntBASIC6.11□□□□□ -1.43
DDX39AO00148 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
DDX39AO00148 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
DDX39AO00148 AC090142.2-201ENST00000483263 416 ntBASIC6.11□□□□□ -1.43
DDX39AO00148 AC091544.1-201ENST00000484702 348 ntBASIC6.11□□□□□ -1.43
DDX39AO00148 RN7SL30P-201ENST00000488416 306 ntBASIC6.11□□□□□ -1.43
DDX39AO00148 RN7SL447P-201ENST00000494711 245 ntBASIC6.11□□□□□ -1.43
DDX39AO00148 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.11□□□□□ -1.43
DDX39AO00148 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.11□□□□□ -1.43
DDX39AO00148 OR8G3P-201ENST00000533406 921 ntBASIC6.11□□□□□ -1.43
DDX39AO00148 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
DDX39AO00148 AC008126.1-201ENST00000549019 480 ntBASIC6.11□□□□□ -1.43
DDX39AO00148 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.11□□□□□ -1.43
DDX39AO00148 AC004825.1-201ENST00000555068 586 ntBASIC6.11□□□□□ -1.43
DDX39AO00148 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.11□□□□□ -1.43
DDX39AO00148 RPL10P14-201ENST00000565265 298 ntBASIC6.11□□□□□ -1.43
DDX39AO00148 AC007448.1-201ENST00000582714 234 ntBASIC6.11□□□□□ -1.43
DDX39AO00148 AP001357.1-201ENST00000586304 1053 ntBASIC6.11□□□□□ -1.43
DDX39AO00148 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.11□□□□□ -1.43
DDX39AO00148 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.11□□□□□ -1.43
DDX39AO00148 MIR6719-201ENST00000622428 87 ntBASIC6.11□□□□□ -1.43
DDX39AO00148 CYP4F35P-202ENST00000636121 390 ntBASIC6.11□□□□□ -1.43
DDX39AO00148 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
DDX39AO00148 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
DDX39AO00148 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
DDX39AO00148 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
DDX39AO00148 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
DDX39AO00148 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
DDX39AO00148 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.11□□□□□ -1.43
DDX39AO00148 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
DDX39AO00148 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
DDX39AO00148 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
DDX39AO00148 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
DDX39AO00148 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.11□□□□□ -1.43
DDX39AO00148 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
DDX39AO00148 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
DDX39AO00148 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
DDX39AO00148 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.1□□□□□ -1.43
DDX39AO00148 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
DDX39AO00148 AL592429.1-201ENST00000403909 1473 ntBASIC6.1□□□□□ -1.43
DDX39AO00148 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.1□□□□□ -1.43
DDX39AO00148 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
DDX39AO00148 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
DDX39AO00148 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
DDX39AO00148 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
DDX39AO00148 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.1□□□□□ -1.43
DDX39AO00148 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
DDX39AO00148 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
DDX39AO00148 SNORD56.6-201ENST00000384569 71 ntBASIC6.1□□□□□ -1.43
DDX39AO00148 RNU1-149P-201ENST00000390870 161 ntBASIC6.1□□□□□ -1.43
DDX39AO00148 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.1□□□□□ -1.43
DDX39AO00148 DPPA2P3-201ENST00000411853 655 ntBASIC6.1□□□□□ -1.43
DDX39AO00148 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.1□□□□□ -1.43
DDX39AO00148 BMS1P13-201ENST00000417301 885 ntBASIC6.1□□□□□ -1.43
DDX39AO00148 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.1□□□□□ -1.43
DDX39AO00148 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.1□□□□□ -1.43
DDX39AO00148 AC245047.2-201ENST00000441060 530 ntBASIC6.1□□□□□ -1.43
DDX39AO00148 AL035090.1-201ENST00000454835 332 ntBASIC6.1□□□□□ -1.43
DDX39AO00148 SNORD125-201ENST00000459538 96 ntBASIC6.1□□□□□ -1.43
DDX39AO00148 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.1□□□□□ -1.43
DDX39AO00148 AC012123.2-201ENST00000485809 248 ntBASIC6.1□□□□□ -1.43
DDX39AO00148 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.1□□□□□ -1.43
DDX39AO00148 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.1□□□□□ -1.43
DDX39AO00148 AC027308.1-201ENST00000517993 110 ntBASIC6.1□□□□□ -1.43
DDX39AO00148 CDC42P3-201ENST00000518493 633 ntBASIC6.1□□□□□ -1.43
DDX39AO00148 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
DDX39AO00148 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.1□□□□□ -1.43
DDX39AO00148 AL049779.2-201ENST00000553847 315 ntBASIC6.1□□□□□ -1.43
DDX39AO00148 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.1□□□□□ -1.43
DDX39AO00148 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.1□□□□□ -1.43
DDX39AO00148 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
DDX39AO00148 AC060766.1-201ENST00000590824 627 ntBASIC6.1□□□□□ -1.43
DDX39AO00148 OR7E18P-201ENST00000592589 702 ntBASIC6.1□□□□□ -1.43
DDX39AO00148 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.1□□□□□ -1.43
DDX39AO00148 AC125494.2-201ENST00000602431 657 ntBASIC6.1□□□□□ -1.43
DDX39AO00148 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.1□□□□□ -1.43
DDX39AO00148 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.1□□□□□ -1.43
DDX39AO00148 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.1□□□□□ -1.43
DDX39AO00148 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
DDX39AO00148 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms