Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 IST1-208ENST00000535424 4082 ntTSL 5 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 TRIM60P19-201ENST00000452879 1462 ntBASIC7.81□□□□□ -1.16
TMEM88BA6NKF7 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 MFSD8-218ENST00000641186 4448 ntBASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 CASC19-260ENST00000641828 2001 ntBASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 SNORA62.2-201ENST00000364672 152 ntBASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 MIR130B-202ENST00000385018 82 ntBASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 AL096800.1-201ENST00000405326 893 ntBASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 RN7SKP216-201ENST00000411050 312 ntBASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 MTCYBP5-201ENST00000423752 1135 ntBASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 RPL21P110-201ENST00000433345 446 ntBASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 SULT1D1P-201ENST00000458020 882 ntBASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 ACA64.1-201ENST00000459171 127 ntBASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 RPL7P48-201ENST00000461513 746 ntBASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 DYNLL1P6-201ENST00000503440 264 ntBASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 PRMT5P1-201ENST00000514351 598 ntBASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 RNA5SP340-201ENST00000517132 107 ntBASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 AC105233.3-201ENST00000531125 744 ntBASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 AL121834.1-201ENST00000572284 509 ntBASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 AC079089.3-201ENST00000603094 673 ntBASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 BUB1P1-201ENST00000603541 607 ntBASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 AC090525.3-201ENST00000605601 189 ntBASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 AC092681.3-201ENST00000609463 678 ntBASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
TMEM88BA6NKF7 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 OR51A10P-201ENST00000307165 937 ntBASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 Y_RNA.18-201ENST00000362461 102 ntBASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 Y_RNA.311-201ENST00000365068 96 ntBASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 BPHL-201ENST00000380368 797 ntTSL 5 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 MIR320B1-201ENST00000390209 79 ntBASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 AL157702.1-201ENST00000398764 426 ntBASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 RPL17P17-201ENST00000419491 557 ntBASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 CDC27P1-201ENST00000445384 715 ntBASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TMEM88BA6NKF7 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms