Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 RN7SKP149-201ENST00000363008 344 ntBASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 RN7SKP250-201ENST00000363924 321 ntBASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 RN7SKP144-201ENST00000411108 279 ntBASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 THEM7P-201ENST00000419556 672 ntBASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 AC104454.1-201ENST00000421341 1401 ntBASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 RPL34P27-201ENST00000428810 349 ntBASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 AC096632.2-201ENST00000438139 1239 ntBASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 Z95152.1-201ENST00000453556 656 ntBASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 RPL7P45-201ENST00000455851 743 ntBASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 MTND2P14-201ENST00000482139 351 ntBASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 RPL34P33-201ENST00000486062 334 ntBASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 AC091951.3-201ENST00000504093 246 ntBASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 AP000926.4-201ENST00000527351 454 ntBASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 AC079064.1-201ENST00000528365 362 ntBASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 AP003033.2-201ENST00000528901 805 ntBASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 AC018638.7-201ENST00000605836 1114 ntBASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 uc_338.29-201ENST00000615099 168 ntBASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 AP003789.1-201ENST00000617737 605 ntBASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 AC026124.2-201ENST00000621847 656 ntBASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 OR8B1P-202ENST00000641132 1178 ntBASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHB4Q9Y5E5 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 AC024651.2-201ENST00000562480 2098 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 AC005261.4-201ENST00000600047 1385 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 SNORD116-9-201ENST00000384000 95 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 SNORD116-3-201ENST00000384287 95 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 SNORD116-7-201ENST00000384404 95 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 SNORD116-5-201ENST00000384462 95 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 MIR188-201ENST00000385034 86 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 AL096711.1-201ENST00000404780 554 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 AL139805.1-201ENST00000407837 289 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 HMGA1P8-201ENST00000414130 321 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 AL008987.1-201ENST00000415528 237 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 RPL7AP14-201ENST00000424041 802 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 MTCO3P30-201ENST00000426425 670 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 AL390023.1-201ENST00000428836 262 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 PSMD10P2-201ENST00000432890 672 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 AC007383.1-201ENST00000445875 636 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 MTND1P27-201ENST00000451117 902 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 MTCO3P16-201ENST00000454456 754 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 AC112187.1-201ENST00000455837 479 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 RN7SL836P-201ENST00000476140 296 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 RPL12P30-201ENST00000488389 499 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 AC106822.1-201ENST00000502647 526 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 RNA5SP441-201ENST00000516809 88 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 AP003080.1-202ENST00000526526 915 ntBASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDHB4Q9Y5E5 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms