Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 AC016252.1-201ENST00000609721 474 ntBASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 CU639417.4-201ENST00000623928 207 ntBASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 AP001642.1-201ENST00000624727 2117 ntBASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 RNA5SP326-201ENST00000363209 110 ntBASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 AC007161.1-204ENST00000423039 460 ntBASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 HSPD1P12-201ENST00000429127 1069 ntBASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 RPS29P14-201ENST00000431518 171 ntBASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 RPL34P6-201ENST00000432390 345 ntBASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 AL450023.1-201ENST00000450868 751 ntBASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 PPIAP19-201ENST00000486414 492 ntBASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 AC138866.2-201ENST00000508650 584 ntBASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 RBM22P12-201ENST00000567098 1255 ntBASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 MIR4505-201ENST00000582238 73 ntBASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 AC008115.3-201ENST00000614874 549 ntBASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 AC025574.2-201ENST00000615621 514 ntBASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 AL357153.4-201ENST00000620487 1016 ntBASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 AC008691.1-209ENST00000642094 814 ntBASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 AC114786.1-201ENST00000512892 1415 ntBASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 RNF19BPY-201ENST00000458209 1550 ntBASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 AC000374.1-201ENST00000434698 1745 ntBASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.02□□□□□ -1.61
TRAPPC4Q9Y296 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 AL731566.1-201ENST00000620490 1937 ntBASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 AC022417.1-201ENST00000624768 1303 ntBASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 RN7SKP6-201ENST00000364795 319 ntBASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 AL031985.1-201ENST00000392713 418 ntBASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 RN7SKP97-201ENST00000410966 333 ntBASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 AL133173.1-201ENST00000423458 397 ntBASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 SUMO2P3-201ENST00000438311 288 ntBASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 HMGN1P36-201ENST00000446623 298 ntBASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 IGBP1P3-201ENST00000447449 1000 ntBASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.01□□□□□ -1.61
TRAPPC4Q9Y296 ASNSP4-201ENST00000511103 447 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms