Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 AC006600.2-201ENST00000624834 2506 ntBASIC2.12□□□□□ -2.07
MACF1Q9UPN3 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 AC091912.1-201ENST00000511351 248 ntBASIC2.12□□□□□ -2.07
MACF1Q9UPN3 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 SIPA1L2-203ENST00000366630 6690 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 OR10T1P-201ENST00000424327 947 ntBASIC2.12□□□□□ -2.07
MACF1Q9UPN3 AL136231.1-201ENST00000429407 730 ntBASIC2.12□□□□□ -2.07
MACF1Q9UPN3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 AL157884.3-201ENST00000448273 1184 ntBASIC2.12□□□□□ -2.07
MACF1Q9UPN3 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 RPL6P9-201ENST00000466502 859 ntBASIC2.12□□□□□ -2.07
MACF1Q9UPN3 UQCRHP4-201ENST00000471686 272 ntBASIC2.12□□□□□ -2.07
MACF1Q9UPN3 AC069306.1-201ENST00000507006 843 ntBASIC2.12□□□□□ -2.07
MACF1Q9UPN3 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 AP003119.3-201ENST00000566747 4192 ntBASIC2.12□□□□□ -2.07
MACF1Q9UPN3 AC104763.2-201ENST00000604179 382 ntBASIC2.12□□□□□ -2.07
MACF1Q9UPN3 uc_338.26-201ENST00000612659 160 ntBASIC2.12□□□□□ -2.07
MACF1Q9UPN3 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
MACF1Q9UPN3 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 RNA5SP22-201ENST00000365393 109 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 RNU6-301P-201ENST00000384277 107 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AL353626.3-201ENST00000413399 657 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 RPL12P43-201ENST00000420608 499 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 CPS1-IT1-201ENST00000628368 2306 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AC046176.1-201ENST00000435260 1170 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AC104978.1-201ENST00000449387 391 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 SRGNP1-201ENST00000603392 451 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AL391261.4-201ENST00000616012 481 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AL035461.2-201ENST00000619201 524 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AL023881.1-201ENST00000621088 301 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 MPP7-203ENST00000375732 5063 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 ATAD2B-201ENST00000238789 8103 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AC011933.1-201ENST00000413334 321 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 RPS29P17-201ENST00000430795 166 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AC146944.2-203ENST00000502493 354 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AC010460.1-201ENST00000507087 466 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AC139495.1-202ENST00000513164 354 ntBASIC2.11□□□□□ -2.07
MACF1Q9UPN3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC2.11□□□□□ -2.07
MACF1Q9UPN3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms