Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRFN1Q9P244 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC092865.1-201ENST00000544395 1023 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC073916.1-201ENST00000545095 130 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 AL121579.2-201ENST00000555466 590 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 YWHAZP1-201ENST00000556286 722 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC018552.1-201ENST00000562099 811 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 MIR548Y-201ENST00000582739 110 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC024255.1-201ENST00000614376 102 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC023510.2-201ENST00000622162 746 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC129778.1-202ENST00000623812 261 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 AL591379.1-207ENST00000635982 261 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC099654.6-201ENST00000636487 512 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC006927.2-201ENST00000639256 389 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 SAMMSON-209ENST00000641222 1100 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRFN1Q9P244 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRFN1Q9P244 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRFN1Q9P244 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.69□□□□□ -1.5
LRFN1Q9P244 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRFN1Q9P244 AP000432.2-201ENST00000624164 2048 ntBASIC5.69□□□□□ -1.5
LRFN1Q9P244 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.68□□□□□ -1.5
LRFN1Q9P244 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRFN1Q9P244 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRFN1Q9P244 GTF2H2B-203ENST00000508065 1432 ntBASIC5.68□□□□□ -1.5
LRFN1Q9P244 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRFN1Q9P244 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 HSPD1P14-201ENST00000432666 1618 ntBASIC5.68□□□□□ -1.5
LRFN1Q9P244 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRFN1Q9P244 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRFN1Q9P244 MIR433-201ENST00000384837 93 ntBASIC5.68□□□□□ -1.5
LRFN1Q9P244 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 AC241520.1-201ENST00000422654 1099 ntBASIC5.68□□□□□ -1.5
LRFN1Q9P244 AC073310.1-201ENST00000423226 1033 ntBASIC5.68□□□□□ -1.5
LRFN1Q9P244 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 RPL12P16-201ENST00000431098 498 ntBASIC5.68□□□□□ -1.5
LRFN1Q9P244 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 AC092967.1-201ENST00000449016 481 ntBASIC5.68□□□□□ -1.5
LRFN1Q9P244 RPL7P48-201ENST00000461513 746 ntBASIC5.68□□□□□ -1.5
LRFN1Q9P244 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 RN7SL214P-201ENST00000487317 265 ntBASIC5.68□□□□□ -1.5
LRFN1Q9P244 AC025458.1-201ENST00000506046 166 ntBASIC5.68□□□□□ -1.5
LRFN1Q9P244 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 RNA5SP400-201ENST00000517155 111 ntBASIC5.68□□□□□ -1.5
LRFN1Q9P244 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRFN1Q9P244 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.68□□□□□ -1.5
LRFN1Q9P244 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 OR5AK3P-201ENST00000527486 1297 ntBASIC5.68□□□□□ -1.5
LRFN1Q9P244 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRFN1Q9P244 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 AC023825.1-201ENST00000566704 1030 ntBASIC5.68□□□□□ -1.5
LRFN1Q9P244 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 AC008521.2-201ENST00000591021 259 ntBASIC5.68□□□□□ -1.5
LRFN1Q9P244 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 AC023762.1-201ENST00000603280 584 ntBASIC5.68□□□□□ -1.5
LRFN1Q9P244 AC108865.2-201ENST00000606881 432 ntBASIC5.68□□□□□ -1.5
LRFN1Q9P244 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 AC112503.1-201ENST00000608436 391 ntBASIC5.68□□□□□ -1.5
LRFN1Q9P244 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.68□□□□□ -1.5
LRFN1Q9P244 AC245014.3-201ENST00000618589 347 ntBASIC5.68□□□□□ -1.5
LRFN1Q9P244 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
LRFN1Q9P244 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRFN1Q9P244 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms