Protein–RNA interactions for Protein: Q9NX36

DNAJC28, DnaJ homolog subfamily C member 28, humanhuman

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAJC28Q9NX36 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 NXF4-202ENST00000416098 1465 ntBASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 COX6B1P3-201ENST00000312310 260 ntBASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 RNA5SP478-201ENST00000364657 115 ntBASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 RN7SKP269-201ENST00000365545 319 ntBASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 GNG5P2-201ENST00000372054 207 ntBASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AL121835.1-201ENST00000404250 354 ntBASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AL449283.1-202ENST00000418249 604 ntBASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AC021876.1-201ENST00000425959 359 ntBASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AC092967.1-201ENST00000449016 481 ntBASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 RN7SL369P-201ENST00000477138 299 ntBASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 CDH12P2-201ENST00000504393 298 ntBASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 IGHV3-63-201ENST00000518422 341 ntBASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 IGKV1D-22-201ENST00000518953 324 ntBASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AC011611.5-201ENST00000552477 578 ntBASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AC099786.3-201ENST00000565735 1410 ntBASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 MRPS21P8-201ENST00000569196 235 ntBASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 SNORD39.2-201ENST00000579995 76 ntBASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AC018618.2-201ENST00000604770 446 ntBASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AL158062.1-201ENST00000619632 745 ntBASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AC120349.3-201ENST00000624377 529 ntBASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AC017007.4-201ENST00000503353 1352 ntBASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.29□□□□□ -1.4
DNAJC28Q9NX36 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 AC117409.1-201ENST00000470499 1310 ntBASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 RNU6-932P-201ENST00000391108 106 ntBASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 AC004386.1-201ENST00000393214 761 ntBASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 AC233289.1-201ENST00000403700 508 ntBASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 RPL7P27-201ENST00000403775 720 ntBASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 RN7SKP97-201ENST00000410966 333 ntBASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 HSPE1P16-201ENST00000426640 348 ntBASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 RPL5P2-201ENST00000429598 854 ntBASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 IGLV3-4-201ENST00000432300 244 ntBASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 DNAJA1P5-201ENST00000440278 943 ntBASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 SEPT14P24-201ENST00000447236 180 ntBASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 HSPE1P22-201ENST00000456856 327 ntBASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 AC068228.1-201ENST00000461723 211 ntBASIC6.28□□□□□ -1.4
DNAJC28Q9NX36 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms