Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 RNA5SP335-201ENST00000363817 110 ntBASIC5.35□□□□□ -1.55
TREX1Q9NSU2 RN7SKP124-201ENST00000364730 341 ntBASIC5.35□□□□□ -1.55
TREX1Q9NSU2 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 RAB5CP1-201ENST00000395972 580 ntBASIC5.35□□□□□ -1.55
TREX1Q9NSU2 OR4K12P-201ENST00000406538 961 ntBASIC5.35□□□□□ -1.55
TREX1Q9NSU2 CBX1P3-201ENST00000413296 527 ntBASIC5.35□□□□□ -1.55
TREX1Q9NSU2 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 NOP56P2-201ENST00000447491 769 ntBASIC5.35□□□□□ -1.55
TREX1Q9NSU2 OR52E3P-201ENST00000452083 936 ntBASIC5.35□□□□□ -1.55
TREX1Q9NSU2 AC144530.1-201ENST00000452862 555 ntBASIC5.35□□□□□ -1.55
TREX1Q9NSU2 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 RPL35AP19-201ENST00000469425 329 ntBASIC5.35□□□□□ -1.55
TREX1Q9NSU2 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 PPIAP19-201ENST00000486414 492 ntBASIC5.35□□□□□ -1.55
TREX1Q9NSU2 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 EIF3KP3-201ENST00000514461 639 ntBASIC5.35□□□□□ -1.55
TREX1Q9NSU2 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 AC020937.1-201ENST00000519677 1013 ntBASIC5.35□□□□□ -1.55
TREX1Q9NSU2 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 AC008521.2-201ENST00000591021 259 ntBASIC5.35□□□□□ -1.55
TREX1Q9NSU2 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 AC015982.1-201ENST00000608113 465 ntBASIC5.35□□□□□ -1.55
TREX1Q9NSU2 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 AL360270.2-201ENST00000562952 5985 ntBASIC5.35□□□□□ -1.55
TREX1Q9NSU2 AC092376.2-201ENST00000622621 4116 ntBASIC5.35□□□□□ -1.55
TREX1Q9NSU2 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TREX1Q9NSU2 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 AC002525.1-201ENST00000624392 1622 ntBASIC5.34□□□□□ -1.55
TREX1Q9NSU2 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 RNA5SP319-201ENST00000362768 119 ntBASIC5.34□□□□□ -1.55
TREX1Q9NSU2 RN7SKP15-201ENST00000364742 309 ntBASIC5.34□□□□□ -1.55
TREX1Q9NSU2 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 RNA5SP487-201ENST00000410186 122 ntBASIC5.34□□□□□ -1.55
TREX1Q9NSU2 RN7SKP293-201ENST00000411389 296 ntBASIC5.34□□□□□ -1.55
TREX1Q9NSU2 RANP7-201ENST00000418085 644 ntBASIC5.34□□□□□ -1.55
TREX1Q9NSU2 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 VTI1BP4-201ENST00000427516 527 ntBASIC5.34□□□□□ -1.55
TREX1Q9NSU2 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 YWHAEP1-201ENST00000453697 763 ntBASIC5.34□□□□□ -1.55
TREX1Q9NSU2 DNAJB5P1-201ENST00000454004 806 ntBASIC5.34□□□□□ -1.55
TREX1Q9NSU2 SEPT7P3-201ENST00000455017 621 ntBASIC5.34□□□□□ -1.55
TREX1Q9NSU2 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 AC079168.1-201ENST00000458741 345 ntBASIC5.34□□□□□ -1.55
TREX1Q9NSU2 RN7SL423P-201ENST00000486202 304 ntBASIC5.34□□□□□ -1.55
TREX1Q9NSU2 RN7SL814P-201ENST00000487715 300 ntBASIC5.34□□□□□ -1.55
TREX1Q9NSU2 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 YWHABP2-201ENST00000540201 713 ntBASIC5.34□□□□□ -1.55
TREX1Q9NSU2 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 AC022404.1-201ENST00000555320 273 ntBASIC5.34□□□□□ -1.55
TREX1Q9NSU2 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 NMNAT1P5-201ENST00000559657 841 ntBASIC5.34□□□□□ -1.55
TREX1Q9NSU2 AC040958.1-201ENST00000561102 201 ntBASIC5.34□□□□□ -1.55
TREX1Q9NSU2 AC020978.7-201ENST00000575953 1187 ntBASIC5.34□□□□□ -1.55
TREX1Q9NSU2 RBM22P1-201ENST00000578589 1214 ntBASIC5.34□□□□□ -1.55
TREX1Q9NSU2 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 RNU6-84P-201ENST00000607737 102 ntBASIC5.34□□□□□ -1.55
TREX1Q9NSU2 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 AC126175.1-201ENST00000617041 758 ntBASIC5.34□□□□□ -1.55
TREX1Q9NSU2 AL691477.1-201ENST00000624398 162 ntBASIC5.34□□□□□ -1.55
TREX1Q9NSU2 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.34□□□□□ -1.55
TREX1Q9NSU2 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.56
TREX1Q9NSU2 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.34□□□□□ -1.56
TREX1Q9NSU2 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
TREX1Q9NSU2 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
TREX1Q9NSU2 AC093671.1-201ENST00000624981 2929 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms