Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AL354766.1-201ENST00000423396 542 ntBASIC5.65□□□□□ -1.5
CISHQ9NSE2 AC093655.2-201ENST00000425735 631 ntBASIC5.65□□□□□ -1.5
CISHQ9NSE2 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.65□□□□□ -1.5
CISHQ9NSE2 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.65□□□□□ -1.5
CISHQ9NSE2 NOP56P2-201ENST00000447491 769 ntBASIC5.65□□□□□ -1.5
CISHQ9NSE2 AC009963.4-201ENST00000448535 339 ntBASIC5.65□□□□□ -1.5
CISHQ9NSE2 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.65□□□□□ -1.5
CISHQ9NSE2 OR2AO1P-201ENST00000476497 403 ntBASIC5.65□□□□□ -1.5
CISHQ9NSE2 RPL5P12-201ENST00000477071 851 ntBASIC5.65□□□□□ -1.5
CISHQ9NSE2 RPL7P39-201ENST00000481157 744 ntBASIC5.65□□□□□ -1.5
CISHQ9NSE2 RPL7P41-201ENST00000485823 957 ntBASIC5.65□□□□□ -1.5
CISHQ9NSE2 AC022133.1-201ENST00000490961 571 ntBASIC5.65□□□□□ -1.5
CISHQ9NSE2 AC015864.1-201ENST00000496512 544 ntBASIC5.65□□□□□ -1.5
CISHQ9NSE2 IMPA1P1-201ENST00000510718 842 ntBASIC5.65□□□□□ -1.5
CISHQ9NSE2 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.65□□□□□ -1.5
CISHQ9NSE2 MIR4489-201ENST00000578869 62 ntBASIC5.65□□□□□ -1.5
CISHQ9NSE2 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CISHQ9NSE2 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CISHQ9NSE2 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
CISHQ9NSE2 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
CISHQ9NSE2 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CISHQ9NSE2 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CISHQ9NSE2 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.65□□□□□ -1.51
CISHQ9NSE2 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CISHQ9NSE2 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.65□□□□□ -1.51
CISHQ9NSE2 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CISHQ9NSE2 ADAM24P-201ENST00000398655 2101 ntBASIC5.65□□□□□ -1.51
CISHQ9NSE2 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CISHQ9NSE2 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CISHQ9NSE2 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CISHQ9NSE2 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.64□□□□□ -1.51
CISHQ9NSE2 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CISHQ9NSE2 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CISHQ9NSE2 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CISHQ9NSE2 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CISHQ9NSE2 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.64□□□□□ -1.51
CISHQ9NSE2 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CISHQ9NSE2 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.64□□□□□ -1.51
CISHQ9NSE2 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CISHQ9NSE2 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CISHQ9NSE2 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CISHQ9NSE2 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CISHQ9NSE2 AC005294.1-201ENST00000355509 281 ntBASIC5.64□□□□□ -1.51
CISHQ9NSE2 RN7SKP153-201ENST00000365026 316 ntBASIC5.64□□□□□ -1.51
CISHQ9NSE2 OR1L6-202ENST00000373684 1044 ntBASIC5.64□□□□□ -1.51
CISHQ9NSE2 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.64□□□□□ -1.51
CISHQ9NSE2 HSPD1P12-201ENST00000429127 1069 ntBASIC5.64□□□□□ -1.51
CISHQ9NSE2 RPL5P2-201ENST00000429598 854 ntBASIC5.64□□□□□ -1.51
CISHQ9NSE2 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.64□□□□□ -1.51
CISHQ9NSE2 AC090018.1-201ENST00000434369 367 ntBASIC5.64□□□□□ -1.51
CISHQ9NSE2 DNAJB5P1-201ENST00000454004 806 ntBASIC5.64□□□□□ -1.51
CISHQ9NSE2 COPS8P2-201ENST00000473228 627 ntBASIC5.64□□□□□ -1.51
CISHQ9NSE2 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.64□□□□□ -1.51
CISHQ9NSE2 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.64□□□□□ -1.51
CISHQ9NSE2 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.64□□□□□ -1.51
CISHQ9NSE2 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CISHQ9NSE2 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.64□□□□□ -1.51
CISHQ9NSE2 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.64□□□□□ -1.51
CISHQ9NSE2 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.64□□□□□ -1.51
CISHQ9NSE2 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CISHQ9NSE2 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CISHQ9NSE2 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CISHQ9NSE2 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CISHQ9NSE2 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CISHQ9NSE2 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CISHQ9NSE2 AP001029.2-203ENST00000589795 4910 ntBASIC5.64□□□□□ -1.51
CISHQ9NSE2 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CISHQ9NSE2 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CISHQ9NSE2 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.63□□□□□ -1.51
CISHQ9NSE2 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.63□□□□□ -1.51
CISHQ9NSE2 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CISHQ9NSE2 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.63□□□□□ -1.51
CISHQ9NSE2 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CISHQ9NSE2 AC109446.4-201ENST00000623235 2755 ntBASIC5.63□□□□□ -1.51
CISHQ9NSE2 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CISHQ9NSE2 GVINP1-202ENST00000531871 7271 ntBASIC5.63□□□□□ -1.51
CISHQ9NSE2 AC092747.4-201ENST00000620519 1861 ntBASIC5.63□□□□□ -1.51
CISHQ9NSE2 U3.2-201ENST00000362981 210 ntBASIC5.63□□□□□ -1.51
CISHQ9NSE2 SNORA48.4-201ENST00000391089 134 ntBASIC5.63□□□□□ -1.51
CISHQ9NSE2 MIR1286-201ENST00000408112 78 ntBASIC5.63□□□□□ -1.51
CISHQ9NSE2 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.63□□□□□ -1.51
CISHQ9NSE2 SLC35E1P1-201ENST00000419313 864 ntBASIC5.63□□□□□ -1.51
CISHQ9NSE2 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.63□□□□□ -1.51
CISHQ9NSE2 AC108075.1-201ENST00000424692 529 ntBASIC5.63□□□□□ -1.51
CISHQ9NSE2 CLUHP1-201ENST00000435012 1190 ntBASIC5.63□□□□□ -1.51
CISHQ9NSE2 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.63□□□□□ -1.51
CISHQ9NSE2 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC5.63□□□□□ -1.51
CISHQ9NSE2 OR2AF1P-201ENST00000454899 889 ntBASIC5.63□□□□□ -1.51
CISHQ9NSE2 RPS26P39-201ENST00000469206 341 ntBASIC5.63□□□□□ -1.51
CISHQ9NSE2 RPS21P4-201ENST00000487122 248 ntBASIC5.63□□□□□ -1.51
CISHQ9NSE2 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.63□□□□□ -1.51
CISHQ9NSE2 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.63□□□□□ -1.51
CISHQ9NSE2 RPS4XP20-201ENST00000505751 772 ntBASIC5.63□□□□□ -1.51
CISHQ9NSE2 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.63□□□□□ -1.51
CISHQ9NSE2 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.63□□□□□ -1.51
CISHQ9NSE2 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.63□□□□□ -1.51
CISHQ9NSE2 AC127381.1-201ENST00000555979 939 ntBASIC5.63□□□□□ -1.51
CISHQ9NSE2 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.63□□□□□ -1.51
CISHQ9NSE2 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.63□□□□□ -1.51
CISHQ9NSE2 AC008814.1-201ENST00000603797 406 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms