Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 MTCO2P23-201ENST00000425216 680 ntBASIC6.72□□□□□ -1.33
VTA1Q9NP79 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 AC127526.2-201ENST00000426436 775 ntBASIC6.72□□□□□ -1.33
VTA1Q9NP79 HMGB3P5-201ENST00000428894 612 ntBASIC6.72□□□□□ -1.33
VTA1Q9NP79 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 GAPDHP48-201ENST00000436626 961 ntBASIC6.72□□□□□ -1.33
VTA1Q9NP79 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 AC002504.1-201ENST00000438281 691 ntBASIC6.72□□□□□ -1.33
VTA1Q9NP79 MTCYBP21-201ENST00000443300 1113 ntBASIC6.72□□□□□ -1.33
VTA1Q9NP79 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 RN7SL352P-201ENST00000466002 277 ntBASIC6.72□□□□□ -1.33
VTA1Q9NP79 RPS26P39-201ENST00000469206 341 ntBASIC6.72□□□□□ -1.33
VTA1Q9NP79 RPS3AP6-201ENST00000484430 795 ntBASIC6.72□□□□□ -1.33
VTA1Q9NP79 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VTA1Q9NP79 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 AP001804.2-201ENST00000533932 910 ntBASIC6.72□□□□□ -1.33
VTA1Q9NP79 AC084824.2-201ENST00000548906 345 ntBASIC6.72□□□□□ -1.33
VTA1Q9NP79 AC008126.1-201ENST00000549019 480 ntBASIC6.72□□□□□ -1.33
VTA1Q9NP79 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VTA1Q9NP79 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 AC105105.5-201ENST00000622635 1294 ntBASIC6.72□□□□□ -1.33
VTA1Q9NP79 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 AC016583.1-201ENST00000624221 2431 ntBASIC6.72□□□□□ -1.33
VTA1Q9NP79 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VTA1Q9NP79 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
VTA1Q9NP79 SEPT7P7-201ENST00000420492 1301 ntBASIC6.72□□□□□ -1.33
VTA1Q9NP79 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
VTA1Q9NP79 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VTA1Q9NP79 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VTA1Q9NP79 AOX3P-204ENST00000491025 2107 ntBASIC6.71□□□□□ -1.33
VTA1Q9NP79 DDX18P6-201ENST00000450119 1997 ntBASIC6.71□□□□□ -1.33
VTA1Q9NP79 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
VTA1Q9NP79 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.71□□□□□ -1.33
VTA1Q9NP79 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.33
VTA1Q9NP79 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
VTA1Q9NP79 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.33
VTA1Q9NP79 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
VTA1Q9NP79 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
VTA1Q9NP79 RNA5SP46-201ENST00000362370 120 ntBASIC6.71□□□□□ -1.34
VTA1Q9NP79 RNU6-252P-201ENST00000363232 107 ntBASIC6.71□□□□□ -1.34
VTA1Q9NP79 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 AL391422.1-201ENST00000402155 436 ntBASIC6.71□□□□□ -1.34
VTA1Q9NP79 ZNF602P-201ENST00000405929 924 ntBASIC6.71□□□□□ -1.34
VTA1Q9NP79 RN7SKP166-201ENST00000410812 305 ntBASIC6.71□□□□□ -1.34
VTA1Q9NP79 AC096533.1-201ENST00000411645 353 ntBASIC6.71□□□□□ -1.34
VTA1Q9NP79 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 OR51A6P-201ENST00000418680 1004 ntBASIC6.71□□□□□ -1.34
VTA1Q9NP79 AC092447.3-201ENST00000426027 686 ntBASIC6.71□□□□□ -1.34
VTA1Q9NP79 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 MTCYBP29-201ENST00000436327 1006 ntBASIC6.71□□□□□ -1.34
VTA1Q9NP79 AL157827.1-201ENST00000447622 132 ntBASIC6.71□□□□□ -1.34
VTA1Q9NP79 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VTA1Q9NP79 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 AC112187.1-201ENST00000455837 479 ntBASIC6.71□□□□□ -1.34
VTA1Q9NP79 CBX1P5-201ENST00000475330 559 ntBASIC6.71□□□□□ -1.34
VTA1Q9NP79 AC068522.1-201ENST00000482895 345 ntBASIC6.71□□□□□ -1.34
VTA1Q9NP79 AC105420.1-201ENST00000504389 582 ntBASIC6.71□□□□□ -1.34
VTA1Q9NP79 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VTA1Q9NP79 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 AL589674.2-201ENST00000604304 337 ntBASIC6.71□□□□□ -1.34
VTA1Q9NP79 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VTA1Q9NP79 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 AL139099.4-201ENST00000614802 114 ntBASIC6.71□□□□□ -1.34
VTA1Q9NP79 RN7SL544P-201ENST00000617232 284 ntBASIC6.71□□□□□ -1.34
VTA1Q9NP79 AL512427.1-201ENST00000618593 349 ntBASIC6.71□□□□□ -1.34
VTA1Q9NP79 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 RN7SL763P-201ENST00000620922 284 ntBASIC6.71□□□□□ -1.34
VTA1Q9NP79 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
VTA1Q9NP79 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms