Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 RPS27AP3-201ENST00000453803 454 ntBASIC5.05□□□□□ -1.6
CHD8Q9HCK8 RN7SL443P-201ENST00000464331 290 ntBASIC5.05□□□□□ -1.6
CHD8Q9HCK8 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 AC011005.3-201ENST00000491624 395 ntBASIC5.05□□□□□ -1.6
CHD8Q9HCK8 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 AC011471.1-201ENST00000585766 187 ntBASIC5.05□□□□□ -1.6
CHD8Q9HCK8 AP003400.2-201ENST00000624036 666 ntBASIC5.05□□□□□ -1.6
CHD8Q9HCK8 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 AP003119.3-201ENST00000566747 4192 ntBASIC5.05□□□□□ -1.6
CHD8Q9HCK8 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 SNORA70C-201ENST00000384538 135 ntBASIC5.05□□□□□ -1.6
CHD8Q9HCK8 AL607077.1-201ENST00000401718 499 ntBASIC5.05□□□□□ -1.6
CHD8Q9HCK8 AC093414.1-201ENST00000434712 514 ntBASIC5.05□□□□□ -1.6
CHD8Q9HCK8 AC073143.1-201ENST00000436316 395 ntBASIC5.05□□□□□ -1.6
CHD8Q9HCK8 AC073073.1-201ENST00000493920 463 ntBASIC5.05□□□□□ -1.6
CHD8Q9HCK8 AC104971.1-201ENST00000495117 578 ntBASIC5.05□□□□□ -1.6
CHD8Q9HCK8 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 RN7SKP288-201ENST00000516227 268 ntBASIC5.05□□□□□ -1.6
CHD8Q9HCK8 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.05□□□□□ -1.6
CHD8Q9HCK8 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 ATG4AP1-201ENST00000416893 538 ntBASIC5.04□□□□□ -1.6
CHD8Q9HCK8 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 AC007559.1-201ENST00000428736 355 ntBASIC5.04□□□□□ -1.6
CHD8Q9HCK8 AC091390.2-201ENST00000432573 374 ntBASIC5.04□□□□□ -1.6
CHD8Q9HCK8 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 AP005205.1-201ENST00000563503 508 ntBASIC5.04□□□□□ -1.6
CHD8Q9HCK8 MIR4691-201ENST00000583764 85 ntBASIC5.04□□□□□ -1.6
CHD8Q9HCK8 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 CRYBB2P1-203ENST00000415709 538 ntBASIC5.04□□□□□ -1.6
CHD8Q9HCK8 PRPF38AP1-201ENST00000451976 933 ntBASIC5.04□□□□□ -1.6
CHD8Q9HCK8 AC097484.1-201ENST00000471148 389 ntBASIC5.04□□□□□ -1.6
CHD8Q9HCK8 AC013356.1-201ENST00000489027 564 ntBASIC5.04□□□□□ -1.6
CHD8Q9HCK8 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CHD8Q9HCK8 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 AC100757.1-201ENST00000616872 1835 ntBASIC5.03□□□□□ -1.6
CHD8Q9HCK8 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 AL365361.1-201ENST00000566942 3481 ntBASIC5.03□□□□□ -1.6
CHD8Q9HCK8 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 RN7SKP284-201ENST00000411002 343 ntBASIC5.03□□□□□ -1.6
CHD8Q9HCK8 RIMKLBP2-201ENST00000424737 654 ntBASIC5.03□□□□□ -1.6
CHD8Q9HCK8 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 AL022237.1-201ENST00000446663 358 ntBASIC5.03□□□□□ -1.6
CHD8Q9HCK8 AC112187.1-201ENST00000455837 479 ntBASIC5.03□□□□□ -1.6
CHD8Q9HCK8 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 RPS23P2-201ENST00000463671 415 ntBASIC5.03□□□□□ -1.6
CHD8Q9HCK8 AC105384.2-201ENST00000508433 640 ntBASIC5.03□□□□□ -1.6
CHD8Q9HCK8 SCARNA16.4-201ENST00000516956 187 ntBASIC5.03□□□□□ -1.6
CHD8Q9HCK8 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 AC022916.3-201ENST00000592961 742 ntBASIC5.03□□□□□ -1.6
CHD8Q9HCK8 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 MIR6853-201ENST00000619642 74 ntBASIC5.03□□□□□ -1.6
CHD8Q9HCK8 AC004777.1-201ENST00000624317 287 ntBASIC5.03□□□□□ -1.6
CHD8Q9HCK8 AC027348.2-201ENST00000624375 642 ntBASIC5.03□□□□□ -1.6
CHD8Q9HCK8 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.03□□□□□ -1.6
CHD8Q9HCK8 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms