Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.22□□□□□ -1.57
LRTM1Q9HBL6 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.22□□□□□ -1.57
LRTM1Q9HBL6 AC244107.2-201ENST00000611773 76 ntBASIC5.22□□□□□ -1.57
LRTM1Q9HBL6 AC022467.1-201ENST00000614738 749 ntBASIC5.22□□□□□ -1.57
LRTM1Q9HBL6 MIR193BHG-214ENST00000641765 509 ntBASIC5.22□□□□□ -1.57
LRTM1Q9HBL6 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
LRTM1Q9HBL6 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.21□□□□□ -1.57
LRTM1Q9HBL6 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
LRTM1Q9HBL6 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
LRTM1Q9HBL6 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
LRTM1Q9HBL6 AC120036.2-201ENST00000509729 1474 ntBASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 LINC02019-201ENST00000608605 2060 ntBASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 AL662874.1-201ENST00000426065 230 ntBASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 BX119321.1-201ENST00000428912 797 ntBASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 SUMO2P1-206ENST00000445436 284 ntBASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 AL450023.1-201ENST00000450868 751 ntBASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 OR52E3P-201ENST00000452083 936 ntBASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 RN7SL717P-201ENST00000478343 297 ntBASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 DEFB109A-201ENST00000482450 265 ntBASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 MTND6P2-201ENST00000512226 524 ntBASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 AC098976.1-201ENST00000513014 541 ntBASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 RBM22P12-201ENST00000567098 1255 ntBASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 AC012616.1-201ENST00000600294 197 ntBASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 LSM1P2-201ENST00000604911 322 ntBASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 SDR42E1P1-201ENST00000611327 477 ntBASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 AC241377.1-201ENST00000619797 406 ntBASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.21□□□□□ -1.58
LRTM1Q9HBL6 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 AC015689.2-201ENST00000528172 1738 ntBASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 HSPD1P12-201ENST00000429127 1069 ntBASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 RPL12P17-201ENST00000432393 498 ntBASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 LDHBP2-201ENST00000456969 1005 ntBASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 AC109481.1-201ENST00000509173 282 ntBASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 IMPA1P1-201ENST00000510718 842 ntBASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 CYCSP22-201ENST00000517555 339 ntBASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 AC090286.3-201ENST00000573133 187 ntBASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 AC016839.1-201ENST00000578162 867 ntBASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 AC092944.2-201ENST00000605443 889 ntBASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 AC211433.2-201ENST00000608433 387 ntBASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 AL136295.6-201ENST00000610486 658 ntBASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 AL353684.1-201ENST00000622677 1120 ntBASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 AC099654.6-201ENST00000636487 512 ntBASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 AL031595.2-201ENST00000624215 19071 ntBASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 AC091305.2-201ENST00000624049 1576 ntBASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 322.6 ms