Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 AC068870.3-201ENST00000625077 2536 ntBASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 RN7SKP69-201ENST00000365390 305 ntBASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 RN7SKP292-201ENST00000365522 317 ntBASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 RNA5SP284-201ENST00000384547 118 ntBASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 BMS1P17-202ENST00000416720 316 ntBASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 AKR1B10P1-201ENST00000425765 942 ntBASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 RPL5P25-201ENST00000441148 775 ntBASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 AC084754.1-201ENST00000463466 464 ntBASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 AC021193.1-201ENST00000511607 420 ntBASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 EIF4EP5-201ENST00000528228 640 ntBASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 AC010547.6-201ENST00000571789 193 ntBASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 AP005403.1-201ENST00000579720 229 ntBASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 AC067838.1-201ENST00000606064 577 ntBASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LRRC40Q9H9A6 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 RNU4-2-201ENST00000365668 141 ntBASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 AL672167.2-201ENST00000377164 879 ntBASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 RNA5SP122-201ENST00000384457 108 ntBASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 MIR621-201ENST00000384919 96 ntBASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 MIR137-201ENST00000385223 102 ntBASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 AL596448.1-201ENST00000415024 392 ntBASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 RPL12P17-201ENST00000432393 498 ntBASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 FMO7P-201ENST00000436045 768 ntBASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 SUMO2P3-201ENST00000438311 288 ntBASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 RN7SL72P-201ENST00000460697 269 ntBASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 AP000797.2-201ENST00000475768 606 ntBASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 PSMA2P2-201ENST00000504319 686 ntBASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 AC138866.2-201ENST00000508650 584 ntBASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 AC109464.1-201ENST00000511091 819 ntBASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 MTND6P2-201ENST00000512226 524 ntBASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 SNORD46.2-201ENST00000516021 102 ntBASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 SCARNA20.4-201ENST00000516969 131 ntBASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 AL118522.2-201ENST00000616045 615 ntBASIC5.54□□□□□ -1.52
LRRC40Q9H9A6 AL359742.1-201ENST00000622497 540 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms