Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL589743.6-201ENST00000611025 117 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AC022079.2-201ENST00000619739 566 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 OR7A1P-202ENST00000641542 1158 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 HSPD1P11-201ENST00000508643 1702 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AC005261.2-201ENST00000593427 4258 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 MTHFD2P5-201ENST00000320415 844 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 SNORA43.1-201ENST00000364863 140 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 RNU6-1005P-201ENST00000384519 107 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 LRRC37BP1-201ENST00000398851 714 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 ATF1P1-201ENST00000406040 927 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 RN7SKP97-201ENST00000410966 333 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 AL354868.1-201ENST00000417077 482 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 MTCO3P4-201ENST00000419236 787 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 KRR1P1-201ENST00000419430 803 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 OR2X1P-201ENST00000421144 687 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 RPS7P14-201ENST00000426405 583 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 MTCYBP29-201ENST00000436327 1006 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 ARMC4P1-201ENST00000438905 707 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 KRT8P51-201ENST00000438938 274 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 OSTCP1-201ENST00000455507 450 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 RN7SL643P-201ENST00000471845 291 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 AC005017.1-201ENST00000482002 490 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 AC134050.1-201ENST00000495088 933 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 ST13P12-201ENST00000508958 1094 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 OR5D2P-201ENST00000524390 911 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 AC026826.3-201ENST00000561747 158 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 ZNF971P-201ENST00000562068 1249 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 AC026898.1-201ENST00000586404 571 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 RMST_10.1-201ENST00000616309 154 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 AC079416.3-201ENST00000624479 549 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 FRG1EP-201ENST00000634469 770 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 AL359091.1-201ENST00000449048 1734 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 AC232271.1-201ENST00000602455 2715 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms