Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 AL034549.2-201ENST00000618285 3373 ntBASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 RPS2P45-201ENST00000469997 2057 ntBASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 AC063923.1-201ENST00000478982 1619 ntBASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 MIR133A2-201ENST00000347538 102 ntBASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 AC093155.2-201ENST00000420734 937 ntBASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 AL133173.1-201ENST00000423458 397 ntBASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 FMO7P-201ENST00000436045 768 ntBASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 PSAT1P4-201ENST00000466500 526 ntBASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 EIF4A2P5-201ENST00000529914 499 ntBASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 PPATP2-201ENST00000605635 508 ntBASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 SAMMSON-227ENST00000642114 1199 ntBASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
UPF3BQ9BZI7 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 AC018628.1-201ENST00000624147 3819 ntBASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 MRPS21P2-201ENST00000424704 264 ntBASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 AC019185.1-201ENST00000442718 389 ntBASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 SETP4-201ENST00000455717 868 ntBASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 AC021193.1-201ENST00000511607 420 ntBASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 HMGN1P9-201ENST00000515212 298 ntBASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 CDH12P4-201ENST00000517835 295 ntBASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 CDH12P3-201ENST00000517935 295 ntBASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 CDH12P1-201ENST00000518435 295 ntBASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 HMGN2P47-201ENST00000559378 272 ntBASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 AC023389.2-201ENST00000580031 955 ntBASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 AC104695.2-201ENST00000605056 775 ntBASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 AC079395.2-201ENST00000610982 737 ntBASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 AL118522.2-201ENST00000616045 615 ntBASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 AC119674.1-217ENST00000641942 1086 ntBASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.49□□□□□ -1.37
UPF3BQ9BZI7 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 OR2AT2P-201ENST00000413438 905 ntBASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 NPM1P4-201ENST00000414095 812 ntBASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 AC079809.1-201ENST00000415468 276 ntBASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 SPRYD7P1-201ENST00000443861 570 ntBASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 LRRC37A14P-201ENST00000452297 462 ntBASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 AL645937.3-201ENST00000453647 936 ntBASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 AL035090.1-201ENST00000454835 332 ntBASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 SIAH1P1-201ENST00000479411 923 ntBASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 OR10G5P-201ENST00000532733 358 ntBASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 FO393422.1-201ENST00000603908 708 ntBASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 AL078621.3-201ENST00000623707 2042 ntBASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms