Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC244517.12-201ENST00000623581 663 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 OR2L1P-202ENST00000641567 1023 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 PARP15-201ENST00000310366 1518 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
USB1Q9BQ65 TRIM51EP-201ENST00000524374 1516 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 ZNF334-206ENST00000625284 2495 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 ERMAP-201ENST00000328249 3949 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
USB1Q9BQ65 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
USB1Q9BQ65 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 PSG9-209ENST00000621109 2019 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
USB1Q9BQ65 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
USB1Q9BQ65 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
USB1Q9BQ65 PACRG-201ENST00000337019 1619 ntTSL 2 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
USB1Q9BQ65 AC006020.1-201ENST00000420179 1854 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 ELL2P4-201ENST00000446870 1376 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 AL354854.1-201ENST00000455940 1363 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 PPBPP2-201ENST00000513150 1362 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
USB1Q9BQ65 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 TRIM48-201ENST00000417545 1445 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USB1Q9BQ65 ALB-219ENST00000621085 1418 ntTSL 5 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 ZNF562-208ENST00000590155 1712 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
USB1Q9BQ65 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USB1Q9BQ65 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USB1Q9BQ65 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USB1Q9BQ65 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USB1Q9BQ65 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 TTTY25P-201ENST00000558356 1505 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 ACER3-212ENST00000532485 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USB1Q9BQ65 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 MIR425-201ENST00000362162 87 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 Y_RNA.255-201ENST00000364581 97 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 PARD3-204ENST00000374768 799 ntTSL 3 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 MIR1184-2-201ENST00000408263 99 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 MIR1184-1-201ENST00000408606 99 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 MIR1184-3-201ENST00000408676 99 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 SNORA73.3-201ENST00000410213 189 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 Y_RNA.615-201ENST00000410769 117 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USB1Q9BQ65 OCM-202ENST00000416608 623 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 AC005517.2-201ENST00000424673 553 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 RPSAP62-201ENST00000432596 833 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 LINC01827-201ENST00000432711 555 ntTSL 2 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 USP24P1-201ENST00000433802 779 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 RPL37A-204ENST00000441179 529 ntTSL 5 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 RPL35P4-201ENST00000446039 322 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 LINC01937-201ENST00000448543 553 ntTSL 4 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 VN1R38P-201ENST00000450265 887 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 HIGD1AP8-201ENST00000453927 274 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 HNRNPDLP3-201ENST00000456745 380 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 RN7SL395P-201ENST00000462960 291 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 RN7SL218P-201ENST00000464637 299 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 AC090142.1-201ENST00000465776 462 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USB1Q9BQ65 MTCO1P29-201ENST00000496868 288 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 TTC39CP1-201ENST00000512513 755 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 SMURF2P1-201ENST00000514992 481 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 HIGD1AP6-201ENST00000521833 279 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 AC126177.6-201ENST00000550420 1009 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 RPL10P15-201ENST00000585756 315 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 APOOP1-201ENST00000604695 592 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 AC087623.4-201ENST00000606593 695 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USB1Q9BQ65 SNORD91A-202ENST00000609620 191 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 BX664608.1-201ENST00000610519 487 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
USB1Q9BQ65 AL117372.1-201ENST00000613711 459 ntTSL 4 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
USB1Q9BQ65 AC009237.17-201ENST00000618111 748 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 AL359757.2-201ENST00000624309 274 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 AL121594.6-201ENST00000633440 261 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USB1Q9BQ65 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USB1Q9BQ65 PREPL-204ENST00000409272 3030 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USB1Q9BQ65 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms