Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 AL607077.1-201ENST00000401718 499 ntBASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 RSU1P3-201ENST00000412878 835 ntBASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 TRBV5-2-201ENST00000489095 273 ntBASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 NANOGP3-201ENST00000605855 286 ntBASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 AC018816.2-201ENST00000621460 353 ntBASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 AMZ2P2-201ENST00000406819 1057 ntBASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 AC091390.3-201ENST00000426478 338 ntBASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 KRT8P51-201ENST00000438938 274 ntBASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 OSTCP1-201ENST00000455507 450 ntBASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 AC005341.1-201ENST00000571086 708 ntBASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 ZNF469-201ENST00000437464 13203 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
CSMD1Q96PZ7 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 U3.3-201ENST00000362986 216 ntBASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 OR6C69P-201ENST00000394268 893 ntBASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 AC096754.1-201ENST00000508904 818 ntBASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 MIR3158-1-201ENST00000583596 81 ntBASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 SAMMSON-226ENST00000642089 1582 ntBASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 SNORD113.2-201ENST00000364166 89 ntBASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 AC073358.1-201ENST00000505671 684 ntBASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 SNX18P1Y-201ENST00000616231 511 ntBASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 GAPDHP49-201ENST00000421421 961 ntBASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 FHP1-201ENST00000442741 703 ntBASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 AL121890.3-201ENST00000618494 516 ntBASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 AC068446.1-201ENST00000556425 1549 ntBASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 AC090220.1-201ENST00000593078 1699 ntBASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 SLITRK1-201ENST00000377084 5189 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 AC007114.2-201ENST00000576014 4281 ntBASIC4.35□□□□□ -1.71
CSMD1Q96PZ7 AC004076.2-201ENST00000620532 3323 ntBASIC4.34□□□□□ -1.71
CSMD1Q96PZ7 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.34□□□□□ -1.71
CSMD1Q96PZ7 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CSMD1Q96PZ7 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CSMD1Q96PZ7 RNA5SP317-201ENST00000410176 116 ntBASIC4.34□□□□□ -1.71
CSMD1Q96PZ7 RNA5SP311-201ENST00000411290 116 ntBASIC4.34□□□□□ -1.71
CSMD1Q96PZ7 CYCSP10-201ENST00000417973 294 ntBASIC4.34□□□□□ -1.71
CSMD1Q96PZ7 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC4.34□□□□□ -1.71
CSMD1Q96PZ7 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.34□□□□□ -1.71
CSMD1Q96PZ7 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.34□□□□□ -1.71
CSMD1Q96PZ7 RNA5SP315-201ENST00000516340 116 ntBASIC4.34□□□□□ -1.71
CSMD1Q96PZ7 RNA5SP312-201ENST00000517068 116 ntBASIC4.34□□□□□ -1.71
CSMD1Q96PZ7 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.34□□□□□ -1.71
CSMD1Q96PZ7 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.34□□□□□ -1.71
CSMD1Q96PZ7 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.34□□□□□ -1.71
CSMD1Q96PZ7 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CSMD1Q96PZ7 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms