Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTP4A1Q93096 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 GARSP1-201ENST00000570895 719 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 AC124916.2-201ENST00000604416 224 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 HIRAP1-201ENST00000605318 787 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 AC009032.1-201ENST00000617574 431 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 AC074276.2-201ENST00000619891 348 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 AL683826.1-201ENST00000624104 627 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 AC005618.4-201ENST00000625053 554 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 AL139254.3-201ENST00000641097 674 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 AL596275.2-207ENST00000641188 675 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 TCP1P3-201ENST00000414406 1498 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTP4A1Q93096 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTP4A1Q93096 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTP4A1Q93096 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTP4A1Q93096 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTP4A1Q93096 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTP4A1Q93096 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTP4A1Q93096 AP004607.3-201ENST00000530354 3915 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTP4A1Q93096 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTP4A1Q93096 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTP4A1Q93096 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTP4A1Q93096 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTP4A1Q93096 RNU6-666P-201ENST00000363499 107 ntBASIC5.22□□□□□ -1.57
PTP4A1Q93096 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTP4A1Q93096 RNU1-136P-201ENST00000384181 164 ntBASIC5.22□□□□□ -1.57
PTP4A1Q93096 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTP4A1Q93096 VDAC2P1-201ENST00000399358 958 ntBASIC5.22□□□□□ -1.57
PTP4A1Q93096 AC079809.1-201ENST00000415468 276 ntBASIC5.22□□□□□ -1.57
PTP4A1Q93096 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 MRPS33P4-201ENST00000434892 317 ntBASIC5.22□□□□□ -1.57
PTP4A1Q93096 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 AL445466.1-201ENST00000448432 357 ntBASIC5.22□□□□□ -1.57
PTP4A1Q93096 NDUFA5P8-201ENST00000449019 346 ntBASIC5.22□□□□□ -1.57
PTP4A1Q93096 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTP4A1Q93096 TAAR4P-201ENST00000454843 1039 ntBASIC5.22□□□□□ -1.57
PTP4A1Q93096 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 RNU1-88P-201ENST00000459274 128 ntBASIC5.22□□□□□ -1.57
PTP4A1Q93096 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 RPSAP37-201ENST00000470913 821 ntBASIC5.22□□□□□ -1.57
PTP4A1Q93096 AC092865.4-201ENST00000477936 615 ntBASIC5.22□□□□□ -1.57
PTP4A1Q93096 AC090543.1-201ENST00000492168 485 ntBASIC5.22□□□□□ -1.57
PTP4A1Q93096 OR7E157P-201ENST00000494376 911 ntBASIC5.22□□□□□ -1.57
PTP4A1Q93096 RN7SL649P-201ENST00000496974 275 ntBASIC5.22□□□□□ -1.57
PTP4A1Q93096 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 GLUD1P3-202ENST00000508551 200 ntBASIC5.22□□□□□ -1.57
PTP4A1Q93096 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 GAPDHP62-201ENST00000515313 990 ntBASIC5.22□□□□□ -1.57
PTP4A1Q93096 TMEM97P2-201ENST00000517841 403 ntBASIC5.22□□□□□ -1.57
PTP4A1Q93096 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 AC084824.2-201ENST00000548906 345 ntBASIC5.22□□□□□ -1.57
PTP4A1Q93096 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 AC026826.3-201ENST00000561747 158 ntBASIC5.22□□□□□ -1.57
PTP4A1Q93096 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 AC007346.1-201ENST00000569208 867 ntBASIC5.22□□□□□ -1.57
PTP4A1Q93096 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 AL133247.2-201ENST00000603236 482 ntBASIC5.22□□□□□ -1.57
PTP4A1Q93096 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTP4A1Q93096 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTP4A1Q93096 AC009313.2-201ENST00000417893 1941 ntBASIC5.22□□□□□ -1.57
PTP4A1Q93096 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTP4A1Q93096 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTP4A1Q93096 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTP4A1Q93096 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTP4A1Q93096 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PTP4A1Q93096 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTP4A1Q93096 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTP4A1Q93096 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.21□□□□□ -1.57
PTP4A1Q93096 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms