Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
ERCC4Q92889 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
ERCC4Q92889 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
ERCC4Q92889 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ERCC4Q92889 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
ERCC4Q92889 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ERCC4Q92889 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
ERCC4Q92889 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ERCC4Q92889 RPL5P19-201ENST00000404228 893 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 AP002530.1-201ENST00000405705 684 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ERCC4Q92889 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.77□□□□□ -1.33
ERCC4Q92889 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.77□□□□□ -1.33
ERCC4Q92889 UBE2V1P9-201ENST00000414760 368 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC6.77□□□□□ -1.33
ERCC4Q92889 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.77□□□□□ -1.33
ERCC4Q92889 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.77□□□□□ -1.33
ERCC4Q92889 RPS15AP30-201ENST00000420976 390 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC6.77□□□□□ -1.33
ERCC4Q92889 VN1R42P-201ENST00000424651 344 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 AC115285.1-201ENST00000424879 736 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 FO393414.1-201ENST00000428697 1184 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 PSMD10P2-201ENST00000432890 672 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 RPL7P34-201ENST00000433316 712 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.77□□□□□ -1.33
ERCC4Q92889 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC6.77□□□□□ -1.33
ERCC4Q92889 AC245291.3-201ENST00000443400 292 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 AL591719.1-201ENST00000444669 744 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 Z99714.1-201ENST00000450463 807 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 RPL7P55-201ENST00000450522 746 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 LRRC37A14P-201ENST00000452297 462 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 RPS7P10-201ENST00000464254 603 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 RPS17P11-201ENST00000474297 293 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 TRBV5-2-201ENST00000489095 273 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.77□□□□□ -1.33
ERCC4Q92889 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC6.77□□□□□ -1.33
ERCC4Q92889 AC095052.1-201ENST00000509955 863 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 AC093816.1-201ENST00000515076 913 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.77□□□□□ -1.33
ERCC4Q92889 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.77□□□□□ -1.33
ERCC4Q92889 AL049779.3-201ENST00000557141 606 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.77□□□□□ -1.33
ERCC4Q92889 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.77□□□□□ -1.33
ERCC4Q92889 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.77□□□□□ -1.33
ERCC4Q92889 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.77□□□□□ -1.33
ERCC4Q92889 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.77□□□□□ -1.33
ERCC4Q92889 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.77□□□□□ -1.33
ERCC4Q92889 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ERCC4Q92889 AC245036.5-201ENST00000596330 847 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 RNU4-5P-201ENST00000607255 135 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ERCC4Q92889 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.77□□□□□ -1.33
ERCC4Q92889 MIR6889-201ENST00000613185 59 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.77□□□□□ -1.33
ERCC4Q92889 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
ERCC4Q92889 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ERCC4Q92889 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
ERCC4Q92889 AC020633.1-201ENST00000468439 2247 ntBASIC6.77□□□□□ -1.33
ERCC4Q92889 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ERCC4Q92889 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.77□□□□□ -1.33
ERCC4Q92889 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC4Q92889 MFSD8-220ENST00000641243 1422 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.76□□□□□ -1.33
ERCC4Q92889 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.76□□□□□ -1.33
ERCC4Q92889 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC4Q92889 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC4Q92889 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
ERCC4Q92889 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
ERCC4Q92889 AC234772.1-201ENST00000377927 937 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC4Q92889 RAB5CP1-201ENST00000395972 580 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 RN7SKP108-201ENST00000411367 328 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 AC098592.2-201ENST00000413158 265 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 VN1R31P-201ENST00000417498 730 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.76□□□□□ -1.33
ERCC4Q92889 AL365338.1-201ENST00000422282 858 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.76□□□□□ -1.33
ERCC4Q92889 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.76□□□□□ -1.33
ERCC4Q92889 NANOGP5-201ENST00000424456 877 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC4Q92889 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC6.76□□□□□ -1.33
ERCC4Q92889 MTND5P25-201ENST00000430499 799 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 AC007563.3-201ENST00000433233 371 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 RPS7P2-201ENST00000435134 607 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 MTCO1P53-201ENST00000441633 699 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 RPL5P10-201ENST00000445207 894 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 AL590004.3-202ENST00000445883 451 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 RPL23AP60-201ENST00000450011 454 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC4Q92889 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.76□□□□□ -1.33
ERCC4Q92889 RPL23AP23-201ENST00000452590 471 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 AC020779.1-201ENST00000478757 796 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 OR5H3P-201ENST00000502817 919 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 AC108103.1-201ENST00000511286 446 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 ZNF519P4-201ENST00000514008 125 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 AC004923.2-201ENST00000529649 369 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.76□□□□□ -1.33
ERCC4Q92889 CSNK1A1P1-202ENST00000563423 981 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.76□□□□□ -1.33
ERCC4Q92889 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms