Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 AC026951.1-201ENST00000559530 2459 ntBASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 ADAM24P-201ENST00000398655 2101 ntBASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 AC006600.2-201ENST00000624834 2506 ntBASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 AL035419.1-201ENST00000397037 564 ntBASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 AC245047.2-201ENST00000441060 530 ntBASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 RN7SL808P-201ENST00000496066 299 ntBASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 IMPA1P1-201ENST00000510718 842 ntBASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 HMGN1P9-201ENST00000515212 298 ntBASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 NRBF2P4-201ENST00000520874 850 ntBASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 AP000676.2-201ENST00000529711 301 ntBASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 AC084824.2-201ENST00000548906 345 ntBASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 TAS2R6P-201ENST00000605022 826 ntBASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 AC010632.3-201ENST00000611377 369 ntBASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 ABCC13-202ENST00000463099 3842 ntBASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC5.54□□□□□ -1.52
SHROOM3Q8TF72 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 RNU1-77P-201ENST00000390868 162 ntBASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AL109941.1-201ENST00000401925 229 ntBASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AC138761.5-201ENST00000433967 325 ntBASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AL772161.1-201ENST00000439130 476 ntBASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AC058823.1-201ENST00000485315 474 ntBASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AC015864.1-201ENST00000496512 544 ntBASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 H3F3BP2-201ENST00000583907 357 ntBASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AC018765.1-201ENST00000623357 3446 ntBASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AC137056.2-201ENST00000624055 1958 ntBASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 U8.4-201ENST00000363626 134 ntBASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 RNA5SP335-201ENST00000363817 110 ntBASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AC005297.1-201ENST00000444765 862 ntBASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 RN7SL459P-201ENST00000481078 302 ntBASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 RNU6-941P-201ENST00000516346 108 ntBASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AC079075.1-201ENST00000559543 878 ntBASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AC244107.2-201ENST00000611773 76 ntBASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AC008115.4-201ENST00000619780 775 ntBASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SHROOM3Q8TF72 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms