Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.34□□□□□ -1.71
TTC9CQ8N5M4 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
TTC9CQ8N5M4 AC010547.6-201ENST00000571789 193 ntBASIC4.34□□□□□ -1.71
TTC9CQ8N5M4 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.34□□□□□ -1.71
TTC9CQ8N5M4 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.34□□□□□ -1.71
TTC9CQ8N5M4 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.34□□□□□ -1.71
TTC9CQ8N5M4 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.34□□□□□ -1.71
TTC9CQ8N5M4 AC027243.2-201ENST00000602530 724 ntBASIC4.34□□□□□ -1.71
TTC9CQ8N5M4 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.34□□□□□ -1.71
TTC9CQ8N5M4 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.34□□□□□ -1.71
TTC9CQ8N5M4 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.34□□□□□ -1.71
TTC9CQ8N5M4 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TTC9CQ8N5M4 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.34□□□□□ -1.71
TTC9CQ8N5M4 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
TTC9CQ8N5M4 AC091305.2-201ENST00000624049 1576 ntBASIC4.34□□□□□ -1.71
TTC9CQ8N5M4 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TTC9CQ8N5M4 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.34□□□□□ -1.71
TTC9CQ8N5M4 AL162456.1-201ENST00000634535 2006 ntBASIC4.34□□□□□ -1.71
TTC9CQ8N5M4 AC104964.3-201ENST00000606115 2860 ntBASIC4.34□□□□□ -1.72
TTC9CQ8N5M4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
TTC9CQ8N5M4 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
TTC9CQ8N5M4 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
TTC9CQ8N5M4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 MTCO1P46-201ENST00000451639 1491 ntBASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 SNORA70.6-201ENST00000383934 134 ntBASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 RNA5SP122-201ENST00000384457 108 ntBASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 RPSAP35-201ENST00000413753 818 ntBASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 IPPKP1-201ENST00000422501 768 ntBASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 AC009784.1-201ENST00000426484 460 ntBASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 RPS10P18-201ENST00000442662 495 ntBASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 AC138866.2-201ENST00000508650 584 ntBASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 RFPL4AP5-201ENST00000514977 504 ntBASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 SEPT10P1-201ENST00000517342 1162 ntBASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 AC022826.1-201ENST00000519383 805 ntBASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 AC012616.1-201ENST00000600294 197 ntBASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 AL359742.1-201ENST00000622497 540 ntBASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 CU639417.4-201ENST00000623928 207 ntBASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 AC073869.8-201ENST00000641806 335 ntBASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 AC021242.1-201ENST00000507315 2035 ntBASIC4.33□□□□□ -1.72
TTC9CQ8N5M4 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
TTC9CQ8N5M4 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
TTC9CQ8N5M4 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
TTC9CQ8N5M4 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TTC9CQ8N5M4 AC092376.2-201ENST00000622621 4116 ntBASIC4.32□□□□□ -1.72
TTC9CQ8N5M4 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TTC9CQ8N5M4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TTC9CQ8N5M4 ABCC13-202ENST00000463099 3842 ntBASIC4.32□□□□□ -1.72
TTC9CQ8N5M4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TTC9CQ8N5M4 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TTC9CQ8N5M4 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.32□□□□□ -1.72
TTC9CQ8N5M4 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.32□□□□□ -1.72
TTC9CQ8N5M4 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TTC9CQ8N5M4 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.32□□□□□ -1.72
TTC9CQ8N5M4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TTC9CQ8N5M4 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TTC9CQ8N5M4 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TTC9CQ8N5M4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TTC9CQ8N5M4 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TTC9CQ8N5M4 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TTC9CQ8N5M4 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms