Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 GVINP1-202ENST00000531871 7271 ntBASIC5.24□□□□□ -1.57
CCDC71Q8IV32 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 RNA5SP46-201ENST00000362370 120 ntBASIC5.24□□□□□ -1.57
CCDC71Q8IV32 AC240504.1-201ENST00000395709 845 ntBASIC5.24□□□□□ -1.57
CCDC71Q8IV32 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 AC096921.1-201ENST00000411661 375 ntBASIC5.24□□□□□ -1.57
CCDC71Q8IV32 AK4P4-201ENST00000419465 646 ntBASIC5.24□□□□□ -1.57
CCDC71Q8IV32 VN1R21P-201ENST00000426703 765 ntBASIC5.24□□□□□ -1.57
CCDC71Q8IV32 HMGB3P24-201ENST00000433260 622 ntBASIC5.24□□□□□ -1.57
CCDC71Q8IV32 NDUFB4P8-201ENST00000435351 367 ntBASIC5.24□□□□□ -1.57
CCDC71Q8IV32 AL359265.1-201ENST00000440296 795 ntBASIC5.24□□□□□ -1.57
CCDC71Q8IV32 LINC02210-201ENST00000444561 288 ntBASIC5.24□□□□□ -1.57
CCDC71Q8IV32 AC073909.1-201ENST00000447112 999 ntBASIC5.24□□□□□ -1.57
CCDC71Q8IV32 DUTP7-201ENST00000507982 486 ntBASIC5.24□□□□□ -1.57
CCDC71Q8IV32 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 SNORA43.3-201ENST00000517240 103 ntBASIC5.24□□□□□ -1.57
CCDC71Q8IV32 IGLV2-28-201ENST00000520681 304 ntBASIC5.24□□□□□ -1.57
CCDC71Q8IV32 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 OR4A17P-201ENST00000526032 904 ntBASIC5.24□□□□□ -1.57
CCDC71Q8IV32 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 AC139697.1-201ENST00000548429 745 ntBASIC5.24□□□□□ -1.57
CCDC71Q8IV32 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 MIR4660-201ENST00000583549 74 ntBASIC5.24□□□□□ -1.57
CCDC71Q8IV32 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 MIR6719-201ENST00000622428 87 ntBASIC5.24□□□□□ -1.57
CCDC71Q8IV32 AC007842.1-201ENST00000597336 2039 ntBASIC5.24□□□□□ -1.57
CCDC71Q8IV32 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 AC018809.2-201ENST00000602436 3823 ntBASIC5.24□□□□□ -1.57
CCDC71Q8IV32 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC71Q8IV32 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 AL603750.1-201ENST00000624216 1717 ntBASIC5.23□□□□□ -1.57
CCDC71Q8IV32 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 SNORA64.1-201ENST00000362600 132 ntBASIC5.23□□□□□ -1.57
CCDC71Q8IV32 RNA5SP132-201ENST00000364725 118 ntBASIC5.23□□□□□ -1.57
CCDC71Q8IV32 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 EI24P3-201ENST00000399046 1062 ntBASIC5.23□□□□□ -1.57
CCDC71Q8IV32 RN7SKP29-201ENST00000410957 272 ntBASIC5.23□□□□□ -1.57
CCDC71Q8IV32 RPS20P25-201ENST00000412447 352 ntBASIC5.23□□□□□ -1.57
CCDC71Q8IV32 AL355433.1-201ENST00000422804 300 ntBASIC5.23□□□□□ -1.57
CCDC71Q8IV32 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 NPM1P48-201ENST00000436002 853 ntBASIC5.23□□□□□ -1.57
CCDC71Q8IV32 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 LRRC37A14P-201ENST00000452297 462 ntBASIC5.23□□□□□ -1.57
CCDC71Q8IV32 RNU6-775P-201ENST00000459318 96 ntBASIC5.23□□□□□ -1.57
CCDC71Q8IV32 AC099521.1-201ENST00000482557 334 ntBASIC5.23□□□□□ -1.57
CCDC71Q8IV32 AC138866.2-201ENST00000508650 584 ntBASIC5.23□□□□□ -1.57
CCDC71Q8IV32 IGKV2-18-201ENST00000522607 343 ntBASIC5.23□□□□□ -1.57
CCDC71Q8IV32 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 AC009852.2-201ENST00000567898 485 ntBASIC5.23□□□□□ -1.57
CCDC71Q8IV32 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 DHFRP1-201ENST00000579682 559 ntBASIC5.23□□□□□ -1.57
CCDC71Q8IV32 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.23□□□□□ -1.57
CCDC71Q8IV32 AL022394.1-201ENST00000606979 292 ntBASIC5.23□□□□□ -1.57
CCDC71Q8IV32 AC079395.2-201ENST00000610982 737 ntBASIC5.23□□□□□ -1.57
CCDC71Q8IV32 RN7SL544P-201ENST00000617232 284 ntBASIC5.23□□□□□ -1.57
CCDC71Q8IV32 RN7SL763P-201ENST00000620922 284 ntBASIC5.23□□□□□ -1.57
CCDC71Q8IV32 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC71Q8IV32 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms