Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
HIST2H3AQ71DI3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HIST2H3AQ71DI3 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
HIST2H3AQ71DI3 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HIST2H3AQ71DI3 OR4G1P-202ENST00000641173 1788 ntBASIC4.8□□□□□ -1.64
HIST2H3AQ71DI3 Z83820.1-201ENST00000456978 1499 ntBASIC4.8□□□□□ -1.64
HIST2H3AQ71DI3 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HIST2H3AQ71DI3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.8□□□□□ -1.64
HIST2H3AQ71DI3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
HIST2H3AQ71DI3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 SMG1P4-204ENST00000523028 4131 ntBASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 RNA5SP122-201ENST00000384457 108 ntBASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 RNA5SP284-201ENST00000384547 118 ntBASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 RPS3P2-201ENST00000421346 701 ntBASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 MGAT2P2-201ENST00000427194 797 ntBASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 FMO7P-201ENST00000436045 768 ntBASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 AC019185.1-201ENST00000442718 389 ntBASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 TAAR4P-201ENST00000454843 1039 ntBASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 AP000797.2-201ENST00000475768 606 ntBASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 ENPP7P11-201ENST00000505915 627 ntBASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 RNU6-1334P-201ENST00000516032 105 ntBASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 AC022826.1-201ENST00000519383 805 ntBASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 AC008115.3-201ENST00000614874 549 ntBASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 AL118522.2-201ENST00000616045 615 ntBASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 AC027279.1-201ENST00000568885 4284 ntBASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HIST2H3AQ71DI3 AC020633.1-201ENST00000468439 2247 ntBASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 NR1H5P-201ENST00000452683 1377 ntBASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 DBIP1-201ENST00000401435 260 ntBASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 NPM1P40-201ENST00000412758 733 ntBASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 SDHDP6-201ENST00000414693 480 ntBASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 AC017019.1-201ENST00000426129 261 ntBASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 MTND6P12-201ENST00000428247 522 ntBASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 RPL12P17-201ENST00000432393 498 ntBASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 AC016772.1-201ENST00000444170 1261 ntBASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 AC073109.1-201ENST00000445066 978 ntBASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 EEF1B2P6-201ENST00000445713 673 ntBASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 AC090589.1-201ENST00000473109 362 ntBASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.78□□□□□ -1.64
HIST2H3AQ71DI3 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms