Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 AC140725.3-201ENST00000616193 880 ntBASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 FRG1HP-204ENST00000617940 757 ntBASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 FBXL21-201ENST00000297158 1305 ntBASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC144BQ3MJ40 AC105235.1-201ENST00000623208 1816 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 BIN2P1-201ENST00000504996 1530 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 RNA5SP510-201ENST00000364697 99 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 RN7SKP206-201ENST00000410823 293 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 SLC9B1P4-201ENST00000421957 1288 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 OSTCP5-201ENST00000425293 453 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 MRPS21P3-201ENST00000436696 262 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AC023141.3-201ENST00000436698 278 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AL391987.1-201ENST00000441025 200 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 RPL7P32-201ENST00000457119 744 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 RN7SL714P-201ENST00000487050 298 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AC093720.1-201ENST00000505681 714 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 RN7SKP67-201ENST00000515905 235 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AC008083.2-201ENST00000546707 476 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AC007494.1-201ENST00000562293 760 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AL160237.3-201ENST00000604114 1013 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AP000894.4-201ENST00000610185 483 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AL121890.3-201ENST00000618494 516 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AC129915.3-201ENST00000634128 948 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 MIR4302-201ENST00000638058 60 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 SEPT7P7-201ENST00000420492 1301 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 EIF3EP1-201ENST00000433978 1316 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AC010329.1-201ENST00000593903 8328 ntBASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC144BQ3MJ40 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 AC007114.2-201ENST00000576014 4281 ntBASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 ZNF29P-201ENST00000225587 168 ntBASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 AC023490.2-201ENST00000359859 470 ntBASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 AL603865.2-201ENST00000401679 213 ntBASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 VTA1P1-201ENST00000414044 866 ntBASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 USP9YP24-201ENST00000434374 697 ntBASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 AL353662.1-201ENST00000439099 327 ntBASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 USP9YP17-201ENST00000444617 696 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms