Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 NDUFB4P8-201ENST00000435351 367 ntBASIC6.29□□□□□ -1.4
GABPAQ06546 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.29□□□□□ -1.4
GABPAQ06546 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.29□□□□□ -1.4
GABPAQ06546 Z92846.1-201ENST00000456203 268 ntBASIC6.29□□□□□ -1.4
GABPAQ06546 snoU13.29-201ENST00000459370 104 ntBASIC6.29□□□□□ -1.4
GABPAQ06546 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
GABPAQ06546 RPS18P6-201ENST00000476880 458 ntBASIC6.29□□□□□ -1.4
GABPAQ06546 AC090114.3-201ENST00000479267 829 ntBASIC6.29□□□□□ -1.4
GABPAQ06546 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.29□□□□□ -1.4
GABPAQ06546 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.29□□□□□ -1.4
GABPAQ06546 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.29□□□□□ -1.4
GABPAQ06546 OR4A17P-201ENST00000526032 904 ntBASIC6.29□□□□□ -1.4
GABPAQ06546 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.29□□□□□ -1.4
GABPAQ06546 AC024940.3-201ENST00000538551 316 ntBASIC6.29□□□□□ -1.4
GABPAQ06546 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.29□□□□□ -1.4
GABPAQ06546 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.29□□□□□ -1.4
GABPAQ06546 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.29□□□□□ -1.4
GABPAQ06546 MTCO1P1-201ENST00000624263 1081 ntBASIC6.29□□□□□ -1.4
GABPAQ06546 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
GABPAQ06546 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.29□□□□□ -1.4
GABPAQ06546 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
GABPAQ06546 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
GABPAQ06546 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
GABPAQ06546 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.28□□□□□ -1.4
GABPAQ06546 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
GABPAQ06546 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
GABPAQ06546 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
GABPAQ06546 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
GABPAQ06546 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.28□□□□□ -1.4
GABPAQ06546 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
GABPAQ06546 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
GABPAQ06546 RNA5SP305-201ENST00000362665 119 ntBASIC6.28□□□□□ -1.4
GABPAQ06546 SNORD56.6-201ENST00000384569 71 ntBASIC6.28□□□□□ -1.4
GABPAQ06546 AL109941.1-201ENST00000401925 229 ntBASIC6.28□□□□□ -1.4
GABPAQ06546 NUDT19P3-201ENST00000404698 555 ntBASIC6.28□□□□□ -1.4
GABPAQ06546 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.28□□□□□ -1.4
GABPAQ06546 EI24P4-201ENST00000423683 1078 ntBASIC6.28□□□□□ -1.4
GABPAQ06546 AC006455.6-201ENST00000426192 893 ntBASIC6.28□□□□□ -1.4
GABPAQ06546 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.28□□□□□ -1.4
GABPAQ06546 AC073072.2-201ENST00000447425 348 ntBASIC6.28□□□□□ -1.4
GABPAQ06546 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.28□□□□□ -1.4
GABPAQ06546 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
GABPAQ06546 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.28□□□□□ -1.4
GABPAQ06546 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.28□□□□□ -1.4
GABPAQ06546 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.28□□□□□ -1.4
GABPAQ06546 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.28□□□□□ -1.4
GABPAQ06546 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.28□□□□□ -1.4
GABPAQ06546 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.28□□□□□ -1.4
GABPAQ06546 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.28□□□□□ -1.4
GABPAQ06546 AC011447.4-201ENST00000587562 111 ntBASIC6.28□□□□□ -1.4
GABPAQ06546 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.28□□□□□ -1.4
GABPAQ06546 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
GABPAQ06546 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.28□□□□□ -1.4
GABPAQ06546 AC133644.2-201ENST00000608142 540 ntBASIC6.28□□□□□ -1.4
GABPAQ06546 AL139124.1-201ENST00000609123 421 ntBASIC6.28□□□□□ -1.4
GABPAQ06546 AC244107.2-201ENST00000611773 76 ntBASIC6.28□□□□□ -1.4
GABPAQ06546 AP003400.3-201ENST00000624904 346 ntBASIC6.28□□□□□ -1.4
GABPAQ06546 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
GABPAQ06546 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
GABPAQ06546 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
GABPAQ06546 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
GABPAQ06546 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
GABPAQ06546 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.28□□□□□ -1.4
GABPAQ06546 AC079097.1-201ENST00000512187 1399 ntBASIC6.28□□□□□ -1.4
GABPAQ06546 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.28□□□□□ -1.4
GABPAQ06546 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.28□□□□□ -1.4
GABPAQ06546 AC138907.8-201ENST00000623981 2256 ntBASIC6.28□□□□□ -1.4
GABPAQ06546 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.28□□□□□ -1.4
GABPAQ06546 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.4
GABPAQ06546 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.27□□□□□ -1.41
GABPAQ06546 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.27□□□□□ -1.41
GABPAQ06546 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.27□□□□□ -1.41
GABPAQ06546 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
GABPAQ06546 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.27□□□□□ -1.41
GABPAQ06546 RPL34P27-201ENST00000428810 349 ntBASIC6.27□□□□□ -1.41
GABPAQ06546 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
GABPAQ06546 CLUHP1-201ENST00000435012 1190 ntBASIC6.27□□□□□ -1.41
GABPAQ06546 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.27□□□□□ -1.41
GABPAQ06546 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.27□□□□□ -1.41
GABPAQ06546 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.27□□□□□ -1.41
GABPAQ06546 AC009127.1-201ENST00000467090 155 ntBASIC6.27□□□□□ -1.41
GABPAQ06546 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.27□□□□□ -1.41
GABPAQ06546 OR51A1P-201ENST00000511110 946 ntBASIC6.27□□□□□ -1.41
GABPAQ06546 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.27□□□□□ -1.41
GABPAQ06546 AC079064.1-201ENST00000528365 362 ntBASIC6.27□□□□□ -1.41
GABPAQ06546 OR4A43P-201ENST00000532938 908 ntBASIC6.27□□□□□ -1.41
GABPAQ06546 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.27□□□□□ -1.41
GABPAQ06546 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.27□□□□□ -1.41
GABPAQ06546 AC024940.4-201ENST00000605507 246 ntBASIC6.27□□□□□ -1.41
GABPAQ06546 AC016590.3-201ENST00000611171 753 ntBASIC6.27□□□□□ -1.41
GABPAQ06546 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.27□□□□□ -1.41
GABPAQ06546 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
GABPAQ06546 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
GABPAQ06546 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
GABPAQ06546 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.27□□□□□ -1.41
GABPAQ06546 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
GABPAQ06546 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
GABPAQ06546 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
GABPAQ06546 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
GABPAQ06546 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms